RNA id: TU210337


Basic Information

Item Value
RNA id TU210337
length 478
RNA type TUCP
GC content 0.54
exon number 1
gene id rasd2
representative False

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15526854 ~ 15528470 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACAGAGGGCCGTCAGACGGTCAGAGGTAACAGAAATTCTCGGCGAGGACGTCGCGTTCTTCGAAACCTCTGCTAAAGAAGGCACCGGAATGGAAGGTGTGTTCACGGCCCTAGCCACTCTGGGCGGAATGCCTGTCGAGACGAGTCCGTCACGGCACCAGATCATATCCATCCTCACCTATCAGTCGATGTGCATCGGCCAGCGAGGCAGGAGAGGGAACCGGGGACTCGGTGCGCCCTGTGCCGCCGTCGATCCTCTGGCTGTCCGCCCGAGCTTCACCAGCGACCTGCGGCTGGTGCTAGAATCAAGCACCAAGCACAACAAACCCAACAAACCCGAGATGTGTCAGATTCAATGAATTGTGATCCTTCTCGATAAACCAATTGCAGTAGTATGCTGCAATTTCATATTATGTAAGGAGTTATACTCCGTATAGCACCTGGCTGGACCAGTGCAatcatcttttgtttttgtagaC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU210325 lncRNA upstream 19622 15507053 ~ 15508319 (+) True G155197
TU210301 lncRNA upstream 78383 15446884 ~ 15449558 (+) True G155180
TU210249 lncRNA upstream 123494 15366920 ~ 15404447 (+) False ndel1b
TU210215 lncRNA upstream 354578 15173092 ~ 15173363 (+) True G155104
TU210178 lncRNA upstream 412493 15055351 ~ 15115448 (+) True G155077
TU210353 lncRNA downstream 15824 15544242 ~ 15544549 (+) True G155212
TU210425 lncRNA downstream 132950 15661368 ~ 15731619 (+) False G155257
TU210429 lncRNA downstream 132950 15661368 ~ 15731619 (+) False G155257
TU210424 lncRNA downstream 137041 15665459 ~ 15731815 (+) True G155257
TU210546 lncRNA downstream 362677 15891095 ~ 15891593 (+) False G155346
XM_039823882.1 mRNA upstream 15515 15510093 ~ 15512426 (+) False arl16
XM_039823881.1 mRNA upstream 15515 15510149 ~ 15512426 (+) False arl16
XM_039823875.1 mRNA upstream 28435 15495687 ~ 15499506 (+) True znf750
XM_039826277.1 mRNA upstream 94654 15428818 ~ 15433287 (+) True atp5pd
XM_039825350.1 mRNA upstream 123336 15394999 ~ 15404605 (+) True ndel1b
XM_039825664.1 mRNA downstream 7274 15535692 ~ 15537840 (+) True LOC120575067
XM_039825662.1 mRNA downstream 9203 15537621 ~ 15541106 (+) True btr02
XM_039825661.1 mRNA downstream 9235 15537653 ~ 15541106 (+) False btr02
XM_039825660.1 mRNA downstream 10479 15538897 ~ 15541106 (+) False btr02
XM_039825663.1 mRNA downstream 10479 15538897 ~ 15541106 (+) False btr02
TU210329 other upstream 15131 15510225 ~ 15512810 (+) True arl16
TU210192 other upstream 388235 15135791 ~ 15139706 (+) True G155088
unassigned_transcript_851 other upstream 535433 14992013 ~ 14992508 (+) True LOC120575440
unassigned_transcript_850 other upstream 541028 14985700 ~ 14986913 (+) True LOC120574428
TU210109 other upstream 544658 14981236 ~ 14983283 (+) False si:dkey-282h22.5
TU210542 other downstream 358772 15887190 ~ 15891018 (+) True LOC120574525
XR_005641831.1 other downstream 1229227 16757645 ~ 16766745 (+) False raver1
XR_005641811.1 other downstream 2188321 17716739 ~ 17724229 (+) False rmi2
TU211348 other downstream 2208561 17736979 ~ 17741048 (+) False pla2g10
XR_005641818.1 other downstream 2752372 18280790 ~ 18304091 (+) False ttyh3a

Expression Profile