RNA id: TU243760



Basic Information


Item Value
RNA id TU243760
length 361
lncRNA type intronic
GC content 0.50
exon number 2
gene id G179955
representative True

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 32959526 ~ 32961547 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


acagacacacacagacacacacacacacacagacacacacagacacacacacacacacacacacacacacacacatacacacacacacacagacacacacacacagacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacagacacagaccaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacagacacacagacacacacacacacacacacacagagacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU243743 lncRNA downstream 10103 32949048 ~ 32949423 (-) True G179952
TU243755 lncRNA downstream 10644 32948376 ~ 32948882 (-) True G179953
TU243757 lncRNA downstream 11374 32947392 ~ 32948152 (-) False G179954
TU243758 lncRNA downstream 11374 32947392 ~ 32948152 (-) True G179954
TU243759 lncRNA downstream 11374 32947392 ~ 32948152 (-) False G179954
TU243776 lncRNA upstream 44012 33005559 ~ 33007018 (-) False G179969
TU243775 lncRNA upstream 44399 33005946 ~ 33007018 (-) True G179969
TU243742 lncRNA upstream 45850 33007397 ~ 33017973 (-) False G179951
TU243771 lncRNA upstream 57122 33018669 ~ 33111051 (-) True G179966
TU243768 lncRNA upstream 57723 33019270 ~ 33078916 (-) True G179963
XM_039779074.1 mRNA downstream 4095 32950042 ~ 32955431 (-) True LOC120545084
XM_039780290.1 mRNA downstream 19236 32934244 ~ 32940290 (-) True trappc1
XM_039780285.1 mRNA downstream 132233 32790695 ~ 32827293 (-) False LOC120545725
XM_039779078.1 mRNA upstream 30828 32992375 ~ 33004529 (-) True hpse
XM_039780245.1 mRNA upstream 48169 33009716 ~ 33102359 (-) True helq
XM_039780246.1 mRNA upstream 48248 33009795 ~ 33102359 (-) False helq
XM_039780273.1 mRNA upstream 132522 33094069 ~ 33096229 (-) True LOC120545720
XM_039780289.1 mRNA upstream 154745 33116292 ~ 33121675 (-) False LOC120545728
XR_005636729.1 other downstream 107601 32849184 ~ 32851925 (-) True LOC120545725
TU243708 other downstream 107916 32717847 ~ 32851610 (-) True G179923
XR_005636726.1 other downstream 222958 32714088 ~ 32736568 (-) False LOC120545708
XR_005636727.1 other downstream 270282 32677989 ~ 32689244 (-) False dusp11
TU243553 other downstream 300174 32652761 ~ 32659352 (-) True LOC120545733
TU243761 other upstream 5748 32967295 ~ 32968150 (-) True LOC120545085
TU243773 other upstream 33655 32995202 ~ 33004440 (-) False hpse
XR_005636728.1 other upstream 132522 33094069 ~ 33096229 (-) False LOC120545720
TU244782 other upstream 450556 33412103 ~ 33412619 (-) True G180628
TU244795 other upstream 700629 33662176 ~ 33707638 (-) True G180640

Expression Profile