RNA id: TU245261



Basic Information


Item Value
RNA id TU245261
length 370
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G180944
representative False

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 35572178 ~ 35574625 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ttcgtaatttccggatttccctattgtctccgcggtaaacgtcacaacgctttgaactgtgggtaattccctttggtaaagtctgcaaagtgaggttatgtgttatagtgagactatgtgttatagtgagactatgtgttatagtgagactatgtgttatagtgaggttatgtgttatagtgagactatgtgttatagtgaggttatgtgttatagtgagactatgtgttatagtgagggtatgtgttatagtgagggtatgtgttatagtgagactatgtgttatagtgagggtatgtgttatagtgagactatgtgttatagtgagggtatgtgttatgtgttatagtgagggtatgtgttatagtgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU245203 lncRNA downstream 28844 35264693 ~ 35544128 (-) True G180911
XR_005636666.1 lncRNA downstream 51032 35519940 ~ 35521940 (-) True LOC120545342
TU245230 lncRNA downstream 152504 35393821 ~ 35420468 (-) True G180921
TU245014 lncRNA downstream 155677 35411987 ~ 35417295 (-) True G180798
XR_005636655.1 lncRNA downstream 160663 35401605 ~ 35412309 (-) True LOC120545332
XR_005636681.1 lncRNA upstream 54208 35628833 ~ 35631315 (-) True LOC120545354
TU245276 lncRNA upstream 76679 35651304 ~ 35691813 (-) True G180957
TU245226 lncRNA upstream 83456 35658081 ~ 35698388 (-) True G180918
TU245277 lncRNA upstream 115821 35690446 ~ 35695392 (-) True G180958
TU245279 lncRNA upstream 115821 35690446 ~ 35695392 (-) False G180958
XM_039779550.1 mRNA downstream 492580 35073125 ~ 35080392 (-) False LOC120545308
XM_039779554.1 mRNA downstream 492588 35036695 ~ 35080384 (-) False LOC120545308
XM_039779551.1 mRNA downstream 492596 35073125 ~ 35080376 (-) False LOC120545308
XM_039779552.1 mRNA downstream 519327 35036695 ~ 35053645 (-) False LOC120545308
XM_039779553.1 mRNA downstream 533489 35036695 ~ 35039483 (-) True LOC120545308
XM_039779576.1 mRNA upstream 115192 35689817 ~ 36035909 (-) False LOC120545322
XM_039779575.1 mRNA upstream 115192 35689817 ~ 35694698 (-) False LOC120545322
XM_039779574.1 mRNA upstream 115193 35689818 ~ 36035923 (-) False LOC120545322
XM_039779466.1 mRNA upstream 160734 35735359 ~ 35758865 (-) False LOC120545270
XM_039779467.1 mRNA upstream 160734 35735359 ~ 35758865 (-) True LOC120545270
TU245007 other downstream 138111 35037024 ~ 35434861 (-) False LOC120545308
XR_005636645.1 other downstream 533489 35037050 ~ 35039483 (-) False LOC120545308
TU245160 other downstream 550895 34986221 ~ 35022077 (-) True G180873
XR_005636644.1 other downstream 707060 34863490 ~ 34865912 (-) False pisd
TU245228 other upstream 115129 35689754 ~ 36035900 (-) True LOC120545322
TU245221 other upstream 242165 35816790 ~ 35963593 (-) True G180916
TU245351 other upstream 740291 36314916 ~ 36320765 (-) False G181004
TU245355 other upstream 740291 36314916 ~ 36318463 (-) False G181004
TU245425 other upstream 999017 36573642 ~ 36576179 (-) False myo5b

Expression Profile