RNA id: TU245203



Basic Information


Item Value
RNA id TU245203
length 241
lncRNA type inter_gene
GC content 0.37
exon number 3
gene id G180911
representative True

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 35264693 ~ 35544128 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AACTCAACACTTCCtgtttcaaattaaaagccCTCTGGACAGAATCCTTTAGGTTCTAtccaggcttttattgtgaaacatgtGCAGTTACTACACGGCTCATCTATTCTCAGCTAGCATCACTTTATGTTTCACAGTTCATCAGACTGGTTTTCTCTGCTCTGGAtctgacagaaaaataatcatgTTTCAGACAGAATTATAAGCAGCAGCATGTTCAGAGAAAGTAAATATCATATTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005636664.1 lncRNA downstream 170720 35085453 ~ 35093973 (-) True LOC120545340
XR_005636660.1 lncRNA downstream 199678 35062260 ~ 35065015 (-) True LOC120545336
XR_005636680.1 lncRNA downstream 213510 35050006 ~ 35051183 (-) True LOC120545353
TU245134 lncRNA downstream 223002 35027724 ~ 35041691 (-) True G180861
TU245173 lncRNA downstream 237240 35026315 ~ 35027453 (-) True G180885
TU245261 lncRNA upstream 28844 35572972 ~ 35574625 (-) False G180944
XR_005636681.1 lncRNA upstream 84705 35628833 ~ 35631315 (-) True LOC120545354
TU245276 lncRNA upstream 107176 35651304 ~ 35691813 (-) True G180957
TU245226 lncRNA upstream 113953 35658081 ~ 35698388 (-) True G180918
TU245277 lncRNA upstream 146318 35690446 ~ 35695392 (-) True G180958
XM_039779550.1 mRNA downstream 184301 35073125 ~ 35080392 (-) False LOC120545308
XM_039779554.1 mRNA downstream 184309 35036695 ~ 35080384 (-) False LOC120545308
XM_039779551.1 mRNA downstream 184317 35073125 ~ 35080376 (-) False LOC120545308
XM_039779552.1 mRNA downstream 211048 35036695 ~ 35053645 (-) False LOC120545308
XM_039779553.1 mRNA downstream 225210 35036695 ~ 35039483 (-) True LOC120545308
XM_039779576.1 mRNA upstream 145689 35689817 ~ 36035909 (-) False LOC120545322
XM_039779575.1 mRNA upstream 145689 35689817 ~ 35694698 (-) False LOC120545322
XM_039779574.1 mRNA upstream 145690 35689818 ~ 36035923 (-) False LOC120545322
XM_039779466.1 mRNA upstream 191231 35735359 ~ 35758865 (-) False LOC120545270
XM_039779467.1 mRNA upstream 191231 35735359 ~ 35758865 (-) True LOC120545270
XR_005636645.1 other downstream 225210 35037050 ~ 35039483 (-) False LOC120545308
TU245160 other downstream 242616 34986221 ~ 35022077 (-) True G180873
XR_005636644.1 other downstream 398781 34863490 ~ 34865912 (-) False pisd
TU245259 other upstream 28050 35572178 ~ 35574625 (-) True G180944
TU245228 other upstream 145626 35689754 ~ 36035900 (-) True LOC120545322
TU245221 other upstream 272662 35816790 ~ 35963593 (-) True G180916
TU245351 other upstream 770788 36314916 ~ 36320765 (-) False G181004
TU245355 other upstream 770788 36314916 ~ 36318463 (-) False G181004

Expression Profile