RNA id: TCONS_00070570


Basic Information

Item Value
RNA id TCONS_00070570
length 1395
RNA type mRNA
GC content 0.43
exon number 9
gene id XLOC_036049
representative True

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 52479026 ~ 52490474 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTCAGTTTGTTGGGCTCGTGTCGACAGATCTGCGTTCATGTACAATGGGCTTCAGCGTGCTCGTGTCCGCgtgcgcgtgtgtttgtgtgtgtgtttatgtgtctgCTGCACCGCTGGGAGACGAGGCTGAAAACGACAGACCTATCATCGGGATTTTGACGCAAGAAGTGGACAGTGAGGTTATGAGAAAGTTCGGGAACACATACATCCCTTCATCATATGTGAAGTACATCGAATCCGCTGGAGCTAGAGTTGTGCCAATTAGGCTAAACCAGAGTTTTGCAGAACATGAAAAGCTCTTCAAGTCAATAAATGGTCTTTTTCTCATCGGAGGTGCAGTGAATCTGGAGACGTCTGACTTCGCTCGCACCGCTGGCTTTTACTTCAGACTTGCGCTTAAGGCGAATGATCAAGGCGACTACTTTCCCATCTGGGGAACATGTCTGGGGTTTCAGCTGCTCACTGTGCTGGTGGCTGGAGAAAACCTGCTGAGTAAAACCACTGCAGAGAACGTCACATATCCACTCAACTTCAGCTCAGAGGCTCTGTCCAGCCGGATGTTTAGCAGCTTTCCATCTGAGCTCCGCAGAGCCCTGTCTGAGGAACCGCTCACTGCAAACTTCCACCATTACGGAGTGACTAAAGAAGCTTTCATGAATAATGAGAAACTCACTGGCTTATTCTCAGTCATCTCCACAAACATCGCACAAAATGGCGCTGAGTTTGTTTCAACCATAGAagGCAGAAAATATCCTTTCTACGGTGTTCAGTGGCATCCAGAAGTGAACCGCTTTCAGTGGAACCCGCATTACAGCTTCCCTCACTCCAGCAATGCTGTTCACGTGTCTTCATTACTGGCTCAATTCTTTGTAAATGAGGggagGAGAAGCACTCATCGGTTCAGTGACGCAGCAGAAGAAAGCGCCGTGCTCATTTACAACTGCAATCCTGTTTATGTGGAGAAAATCTCTGCATATGAACAGTCCTATTTCTTTTAAAGACACAAGAGTTTTGCACAACACATGTAGCCTGTAATAATGACAGACAGACCTCATATTTAAAGTGACGTACGGTTCACTCTAAAGAACTAAAATTGAGGCAATAAAAGGAAAAAgtaaatggatgttttttttcccaGCATTATTTAGAAttaagtttggaacaagtgaggaATGAGGACATTATGACAggacttttatttttgggtgaactgtccctttaagaacatAATccagctatgttttcagaatgttgTGGCAAGGTTATGAACAGTTTTTTCTTTTAGTAATCATAAAAAACTGTATTCTGTCAGTGTTATCTAGTCTTACTAATCATTTGTAACAGTAATCAGTCTCAAAAGTTGTTGTTagttttgttattaaaactattatgttt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000162885

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00072299 lncRNA upstream 700435 51775431 ~ 51778591 (+) False XLOC_036041
TCONS_00072304 lncRNA downstream 24714 52515188 ~ 52530506 (+) True XLOC_036051
TCONS_00070577 lncRNA downstream 40464 52530938 ~ 52534598 (+) False XLOC_036052
TCONS_00071972 lncRNA downstream 106914 52597388 ~ 52604066 (+) False XLOC_036053
TCONS_00070579 lncRNA downstream 110584 52601058 ~ 52601775 (+) False XLOC_036053
TCONS_00071973 lncRNA downstream 110783 52601257 ~ 52604066 (+) False XLOC_036053
TCONS_00070569 mRNA upstream 31925 52442785 ~ 52447101 (+) True XLOC_036048
TCONS_00070568 mRNA upstream 33038 52442622 ~ 52445988 (+) False XLOC_036048
TCONS_00070567 mRNA upstream 47504 52415614 ~ 52431522 (+) True XLOC_036047
TCONS_00070566 mRNA upstream 75761 52377516 ~ 52403265 (+) True XLOC_036046
TCONS_00070564 mRNA upstream 128342 52314542 ~ 52350684 (+) False XLOC_036045
TCONS_00070571 mRNA downstream 962 52491436 ~ 52510317 (+) False XLOC_036050
TCONS_00070572 mRNA downstream 12866 52503340 ~ 52509557 (+) True XLOC_036050
TCONS_00070573 mRNA downstream 24714 52515188 ~ 52529642 (+) False XLOC_036051
TCONS_00070574 mRNA downstream 40415 52530889 ~ 52547656 (+) False XLOC_036052
TCONS_00070575 mRNA downstream 40421 52530895 ~ 52547957 (+) False XLOC_036052
TCONS_00070562 other upstream 316062 52161861 ~ 52162964 (+) True XLOC_036043
TCONS_00070552 other upstream 1511027 50966806 ~ 50967999 (+) True XLOC_036035
TCONS_00070536 other upstream 2660155 49801662 ~ 49818871 (+) True XLOC_036021
TCONS_00070526 other upstream 3098723 49378890 ~ 49380303 (+) True XLOC_036016
TCONS_00070520 other upstream 3373975 49092039 ~ 49105051 (+) False XLOC_036010
TCONS_00070576 other downstream 40463 52530937 ~ 52543392 (+) False XLOC_036052
TCONS_00070587 other downstream 533065 53023539 ~ 53023617 (+) True XLOC_036064
TCONS_00070588 other downstream 533205 53023679 ~ 53023764 (+) True XLOC_036065
TCONS_00070598 other downstream 755168 53245642 ~ 53255762 (+) True XLOC_036071
TCONS_00070607 other downstream 1005727 53496201 ~ 53498302 (+) True XLOC_036078

Expression Profile

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