RNA id: TU255124



Basic Information


Item Value
RNA id TU255124
length 732
lncRNA type read_through
GC content 0.38
exon number 3
gene id G188352
representative False

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 30611681 ~ 30882446 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TAAGCTGGTTGTTGAGAAACAAatgcattacttgaagcctgaaaaGATGGAGTTTCATGTGATCTTGTGATACCGCGACTATCTAGCTGCATTCAAGGTCAGCCAATCAGACCAGGTAGATGGTATTCTCTACATCCATTGGCATCTCTGACTATCCTGCCATTAAAAGTTTACATGGTATCCATATCACTCTTGCTGAGCCACATAAATACCTAAGAATTTGGCTTGACAGCAGACTGGAATTTAAGATTCATATTCAACATTTGAGCCAAATATGTTATCAAACTAGGCCTTCCATACAGAATTAAAAGGGGTATGTCTGTCTGGGGTCTGAAACCATAAAAATACTGTCAGCTTCCTCATAAAGTGTGTGCTGTCCCCCGTACATTAGggctttacatttttttaaagtagtgaAAATGTTCAACACCACTGATGTAATTAAGAAAATGTTTGTTGAATGTTTGCTTTAGAAGTGCTCATGTCCCAGCATTGGACTTTCTTCATTAGCTACTTACTATGTATGCCAGCAGAACACAAGCATCTTACAACTACTACAAAAAAGGCTGTGTTGTAACTTGACTTAACATTTTGATGTACACAATaaacaatgaatgaatgaatgaattttgTGGCAGTAACTCTCTGTCAGCCTAAAGTTTTCTAACAGAGTACCTCAGCATTAATCTTGGAGGTGTTCACCCTTCCCAACTGCTTCAAACTCAAAGCTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU255103 lncRNA upstream 7288 30611681 ~ 30613974 (+) False G188352
TU255197 lncRNA upstream 75999 30476757 ~ 30545263 (+) True G188374
XR_005636983.1 lncRNA upstream 120018 30499354 ~ 30501244 (+) True LOC120546896
TU255183 lncRNA upstream 185465 30411623 ~ 30435797 (+) True G188367
TU255138 lncRNA downstream 60575 30881961 ~ 30882446 (+) False G188352
TU255262 lncRNA downstream 199195 31020581 ~ 31020954 (+) True G188421
XR_005636875.1 lncRNA downstream 262085 31083471 ~ 31086840 (+) True LOC120546487
TU255283 lncRNA downstream 266424 31087810 ~ 31093393 (+) True G188430
TU255291 lncRNA downstream 278456 31099842 ~ 31100187 (+) True G188438
XM_039782129.1 mRNA upstream 286520 30324972 ~ 30334742 (+) False angel2
XM_039782158.1 mRNA downstream 5373 30826759 ~ 30830636 (+) True LOC120546904
XM_039782157.1 mRNA downstream 16345 30837731 ~ 30850277 (+) True LOC120546903
XM_039782156.1 mRNA downstream 23669 30845055 ~ 30850277 (+) True LOC120546902
XM_039782152.1 mRNA downstream 42004 30863390 ~ 30872873 (+) True LOC120546900
XM_039782153.1 mRNA downstream 42004 30863390 ~ 30872873 (+) False LOC120546900
unassigned_transcript_1091 other upstream 247524 30373666 ~ 30373738 (+) True trnat-ugu_4
TU255018 other upstream 975439 29645254 ~ 29645823 (+) True G188296
TU254981 other upstream 1157388 29461849 ~ 29463874 (+) True G188268
TU254910 other upstream 1200535 29419376 ~ 29420727 (+) True G188207
TU254896 other upstream 1308898 29292741 ~ 29312364 (+) False si:ch211-245h14.1
TU255105 other downstream 32589 30853975 ~ 30855364 (+) False G188352
XR_005637052.1 other downstream 676569 31497955 ~ 31498174 (+) True LOC120547349
XR_005637053.1 other downstream 677723 31499109 ~ 31499328 (+) True LOC120547350
XR_005637054.1 other downstream 679449 31500835 ~ 31501054 (+) True LOC120547351
XR_005637055.1 other downstream 682623 31504009 ~ 31504228 (+) True LOC120547352

Expression Profile