Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00073415 |
| length | 781 |
| RNA type | processed_transcript |
| GC content | 0.48 |
| exon number | 3 |
| gene id | XLOC_037304 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 35843732 ~ 35865528 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0033173 | calcineurin-NFAT signaling cascade | biological_process |
| GO:0002040 | sprouting angiogenesis | biological_process |
| GO:0070884 | regulation of calcineurin-NFAT signaling cascade | biological_process |
| GO:0019722 | calcium-mediated signaling | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0008597 | calcium-dependent protein serine/threonine phosphatase regulator activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040801-135 | Predicted to enable calcium-dependent protein serine/threonine phosphatase regulator activity. Acts upstream of or within sprouting angiogenesis. Predicted to be active in cytoplasm and nucleus. Is expressed in brain; cardiac ventricle; heart; heart tube; and yolk syncytial layer. Human ortholog(s) of this gene implicated in Alzheimer's disease. Orthologous to human RCAN1 (regulator of calcineurin 1). |
| ensembl_id | ENSDART00000138963 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00075169 | lncRNA | upstream | 694150 | 35160698 ~ 35167934 (+) | True | XLOC_037301 |
| TCONS_00075168 | lncRNA | upstream | 698420 | 35160644 ~ 35163664 (+) | False | XLOC_037301 |
| TCONS_00075167 | lncRNA | upstream | 780088 | 35077550 ~ 35081996 (+) | False | XLOC_037300 |
| TCONS_00073408 | lncRNA | upstream | 780854 | 35079570 ~ 35081230 (+) | True | XLOC_037300 |
| TCONS_00073406 | lncRNA | upstream | 831977 | 35026304 ~ 35030107 (+) | True | XLOC_037299 |
| TCONS_00075170 | lncRNA | downstream | 124002 | 35987844 ~ 36102672 (+) | True | XLOC_037307 |
| TCONS_00075171 | lncRNA | downstream | 260911 | 36124753 ~ 36177421 (+) | True | XLOC_037308 |
| TCONS_00075172 | lncRNA | downstream | 906822 | 36770664 ~ 36775514 (+) | True | XLOC_037310 |
| TCONS_00075173 | lncRNA | downstream | 1064213 | 36928055 ~ 36930192 (+) | False | XLOC_037312 |
| TCONS_00075174 | lncRNA | downstream | 1064213 | 36928055 ~ 36932532 (+) | True | XLOC_037312 |
| TCONS_00073410 | mRNA | upstream | 19709 | 35832294 ~ 35842375 (+) | False | XLOC_037303 |
| TCONS_00073411 | mRNA | upstream | 25910 | 35832370 ~ 35836174 (+) | True | XLOC_037303 |
| TCONS_00073407 | mRNA | upstream | 780103 | 35077546 ~ 35081981 (+) | False | XLOC_037300 |
| TCONS_00073404 | mRNA | upstream | 835476 | 35017702 ~ 35026608 (+) | False | XLOC_037299 |
| TCONS_00073401 | mRNA | upstream | 836567 | 35014728 ~ 35025517 (+) | False | XLOC_037299 |
| TCONS_00073416 | mRNA | downstream | 13085 | 35876927 ~ 35885260 (+) | True | XLOC_037305 |
| TCONS_00073417 | mRNA | downstream | 37712 | 35901554 ~ 35922201 (+) | True | XLOC_037306 |
| TCONS_00073418 | mRNA | downstream | 451025 | 36314867 ~ 36694998 (+) | False | XLOC_037309 |
| TCONS_00073419 | mRNA | downstream | 492898 | 36356740 ~ 36694998 (+) | True | XLOC_037309 |
| TCONS_00073424 | mRNA | downstream | 1082498 | 36946340 ~ 36956667 (+) | True | XLOC_037313 |
| TCONS_00073409 | other | upstream | 432768 | 35429202 ~ 35429316 (+) | True | XLOC_037302 |
| TCONS_00073405 | other | upstream | 839770 | 35017847 ~ 35022314 (+) | False | XLOC_037299 |
| TCONS_00073397 | other | upstream | 892517 | 34969450 ~ 34969567 (+) | True | XLOC_037296 |
| TCONS_00073390 | other | upstream | 1071197 | 34790750 ~ 34790887 (+) | True | XLOC_037293 |
| TCONS_00073386 | other | upstream | 1432864 | 34426291 ~ 34429220 (+) | True | XLOC_037290 |
| TCONS_00073420 | other | downstream | 930542 | 36794384 ~ 36795322 (+) | False | XLOC_037311 |
| TCONS_00073421 | other | downstream | 930877 | 36794719 ~ 36797775 (+) | False | XLOC_037311 |
| TCONS_00073422 | other | downstream | 930877 | 36794719 ~ 36797828 (+) | False | XLOC_037311 |
| TCONS_00073423 | other | downstream | 930877 | 36794719 ~ 36797834 (+) | True | XLOC_037311 |
| TCONS_00073428 | other | downstream | 1317598 | 37181440 ~ 37181557 (+) | True | XLOC_037317 |
