Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00007135 |
| length | 1193 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 5 |
| gene id | XLOC_003674 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 41089574 ~ 41105632 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-121113-2 | Predicted to enable metal ion binding activity. Orthologous to human PHF13 (PHD finger protein 13). |
| ensembl_id | ENSDART00000170023 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00008682 | lncRNA | upstream | 133451 | 40948472 ~ 40956123 (+) | False | XLOC_003671 |
| TCONS_00008681 | lncRNA | upstream | 136694 | 40948472 ~ 40952880 (+) | False | XLOC_003671 |
| TCONS_00008679 | lncRNA | upstream | 139427 | 40902150 ~ 40950147 (+) | False | XLOC_003671 |
| TCONS_00007140 | lncRNA | downstream | 87686 | 41192329 ~ 41201272 (+) | False | XLOC_003676 |
| TCONS_00007141 | lncRNA | downstream | 90751 | 41195394 ~ 41201272 (+) | True | XLOC_003676 |
| TCONS_00007142 | lncRNA | downstream | 118842 | 41223485 ~ 41235090 (+) | True | XLOC_003677 |
| TCONS_00008422 | lncRNA | downstream | 355205 | 41459848 ~ 41473741 (+) | True | XLOC_003679 |
| TCONS_00008683 | lncRNA | downstream | 828457 | 41933100 ~ 41934619 (+) | True | XLOC_003684 |
| TCONS_00007134 | mRNA | upstream | 21785 | 41064822 ~ 41067789 (+) | True | XLOC_003673 |
| TCONS_00007129 | mRNA | upstream | 241959 | 40812590 ~ 40847615 (+) | False | XLOC_003668 |
| TCONS_00007130 | mRNA | upstream | 245548 | 40831620 ~ 40844026 (+) | True | XLOC_003668 |
| TCONS_00007125 | mRNA | upstream | 415504 | 40649412 ~ 40674070 (+) | False | XLOC_003667 |
| TCONS_00007126 | mRNA | upstream | 415504 | 40649413 ~ 40674070 (+) | False | XLOC_003667 |
| TCONS_00007138 | mRNA | downstream | 30412 | 41135055 ~ 41157954 (+) | False | XLOC_003675 |
| TCONS_00007143 | mRNA | downstream | 138001 | 41242644 ~ 41372948 (+) | False | XLOC_003678 |
| TCONS_00007144 | mRNA | downstream | 138451 | 41243094 ~ 41286090 (+) | False | XLOC_003678 |
| TCONS_00007145 | mRNA | downstream | 138451 | 41243094 ~ 41308742 (+) | False | XLOC_003678 |
| TCONS_00007146 | mRNA | downstream | 138451 | 41243094 ~ 41364446 (+) | False | XLOC_003678 |
| TCONS_00007131 | other | upstream | 200280 | 40889180 ~ 40889294 (+) | True | XLOC_003670 |
| TCONS_00007127 | other | upstream | 433703 | 40649471 ~ 40655871 (+) | False | XLOC_003667 |
| TCONS_00007097 | other | upstream | 2285836 | 38803611 ~ 38803738 (+) | True | XLOC_003642 |
| TCONS_00007094 | other | upstream | 2501008 | 38588451 ~ 38588566 (+) | True | XLOC_003640 |
| TCONS_00007082 | other | upstream | 3439546 | 37647553 ~ 37650028 (+) | True | XLOC_003630 |
| TCONS_00007137 | other | downstream | 6026 | 41110669 ~ 41157928 (+) | False | XLOC_003675 |
| TCONS_00007139 | other | downstream | 30966 | 41135609 ~ 41157926 (+) | True | XLOC_003675 |
| TCONS_00007149 | other | downstream | 360464 | 41465107 ~ 41465236 (+) | True | XLOC_003680 |
| TCONS_00007172 | other | downstream | 1520728 | 42625371 ~ 42625487 (+) | True | XLOC_003703 |
| TCONS_00007182 | other | downstream | 1940183 | 43044826 ~ 43044949 (+) | True | XLOC_003709 |
