RNA id: TCONS_00007138



Basic Information


Item Value
RNA id TCONS_00007138
length 344
RNA type mRNA
GC content 0.54
exon number 4
gene id XLOC_003675
representative False

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 41110669 ~ 41157954 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


CCTCCCGCCTCTCGCCCCCTCCACAGCCGCGTCCTCGCCGTGAACGCGCGTGGTACCCCCCCGGTCGctaggaggaggaggaggaggaggaggatgtggCGCGCGGAGGGGAAATGGCTGCCGAAAACAAGCCGGAAGgcatggtgtgggagtgtctatttgggcacgctgactttcagagtttttaatcttgttttgaacgttgaaaaTGAACATGGACATTTGAAAATCTACTTGCCCAAGAAGCTTCTGGAATGCCTTCCCAAATGCTCCTCCCTGCCCAAGGAGAGACATCGCTGGAACACCAACGAGGTAAGAAGCTTtgattagactttttttttcat

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000173252

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00008682 lncRNA upstream 178932 40948472 ~ 40956123 (+) False XLOC_003671
TCONS_00008681 lncRNA upstream 182175 40948472 ~ 40952880 (+) False XLOC_003671
TCONS_00008679 lncRNA upstream 184908 40902150 ~ 40950147 (+) False XLOC_003671
TCONS_00007140 lncRNA downstream 34375 41192329 ~ 41201272 (+) False XLOC_003676
TCONS_00007141 lncRNA downstream 37440 41195394 ~ 41201272 (+) True XLOC_003676
TCONS_00007142 lncRNA downstream 65531 41223485 ~ 41235090 (+) True XLOC_003677
TCONS_00008422 lncRNA downstream 301894 41459848 ~ 41473741 (+) True XLOC_003679
TCONS_00008683 lncRNA downstream 775146 41933100 ~ 41934619 (+) True XLOC_003684
TCONS_00007136 mRNA upstream 29423 41090440 ~ 41105632 (+) True XLOC_003674
TCONS_00007135 mRNA upstream 30412 41089574 ~ 41104643 (+) False XLOC_003674
TCONS_00007134 mRNA upstream 67266 41064822 ~ 41067789 (+) True XLOC_003673
TCONS_00007129 mRNA upstream 287440 40812590 ~ 40847615 (+) False XLOC_003668
TCONS_00007130 mRNA upstream 291029 40831620 ~ 40844026 (+) True XLOC_003668
TCONS_00007143 mRNA downstream 84690 41242644 ~ 41372948 (+) False XLOC_003678
TCONS_00007144 mRNA downstream 85140 41243094 ~ 41286090 (+) False XLOC_003678
TCONS_00007145 mRNA downstream 85140 41243094 ~ 41308742 (+) False XLOC_003678
TCONS_00007146 mRNA downstream 85140 41243094 ~ 41364446 (+) False XLOC_003678
TCONS_00007147 mRNA downstream 85371 41243325 ~ 41285885 (+) True XLOC_003678
TCONS_00007131 other upstream 245761 40889180 ~ 40889294 (+) True XLOC_003670
TCONS_00007127 other upstream 479184 40649471 ~ 40655871 (+) False XLOC_003667
TCONS_00007097 other upstream 2331317 38803611 ~ 38803738 (+) True XLOC_003642
TCONS_00007094 other upstream 2546489 38588451 ~ 38588566 (+) True XLOC_003640
TCONS_00007082 other upstream 3485027 37647553 ~ 37650028 (+) True XLOC_003630
TCONS_00007149 other downstream 307153 41465107 ~ 41465236 (+) True XLOC_003680
TCONS_00007172 other downstream 1467417 42625371 ~ 42625487 (+) True XLOC_003703
TCONS_00007182 other downstream 1886872 43044826 ~ 43044949 (+) True XLOC_003709
TCONS_00007198 other downstream 2866808 44024762 ~ 44024878 (+) True XLOC_003725
TCONS_00007203 other downstream 3166807 44324761 ~ 44326292 (+) False XLOC_003732

Expression Profile


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