Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU243150 |
| length | 247 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G205306 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 4563408 ~ 4563654 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU243143 | lncRNA | upstream | 11543 | 4549561 ~ 4551865 (+) | True | G205299 |
| TU243147 | lncRNA | upstream | 25253 | 4537498 ~ 4538155 (+) | True | G205303 |
| TU243105 | lncRNA | upstream | 169150 | 4393925 ~ 4394258 (+) | True | G205263 |
| TU243092 | lncRNA | upstream | 203034 | 4359405 ~ 4360374 (+) | True | G205250 |
| TU243087 | lncRNA | upstream | 206872 | 4356318 ~ 4356536 (+) | True | G205245 |
| TU243167 | lncRNA | downstream | 56564 | 4620218 ~ 4670637 (+) | False | plekhh3 |
| TU243159 | lncRNA | downstream | 108106 | 4671760 ~ 4673029 (+) | True | G205315 |
| TU243164 | lncRNA | downstream | 142591 | 4706245 ~ 4711309 (+) | False | retreg3 |
| TU243290 | lncRNA | downstream | 330886 | 4894540 ~ 4955358 (+) | False | G205436 |
| XR_004579387.1 | lncRNA | downstream | 360260 | 4923914 ~ 4925682 (+) | True | LOC117598842 |
| XM_034310291.1 | mRNA | upstream | 13930 | 4527593 ~ 4549478 (+) | True | ezh1 |
| XM_026916489.2 | mRNA | upstream | 337363 | 4215915 ~ 4226045 (+) | True | moto |
| XM_026916490.2 | mRNA | upstream | 337363 | 4215915 ~ 4226045 (+) | False | moto |
| XM_026916776.2 | mRNA | upstream | 431933 | 4120854 ~ 4131475 (+) | True | ccdc47 |
| XM_026916775.2 | mRNA | upstream | 458654 | 4057751 ~ 4104754 (+) | False | kcnh6a |
| XM_026916627.2 | mRNA | downstream | 62839 | 4626493 ~ 4670646 (+) | True | plekhh3 |
| XM_026916628.2 | mRNA | downstream | 62839 | 4626493 ~ 4670646 (+) | False | plekhh3 |
| XM_026916630.2 | mRNA | downstream | 91707 | 4655361 ~ 4670646 (+) | False | plekhh3 |
| XM_026916470.2 | mRNA | downstream | 128823 | 4692477 ~ 4711316 (+) | True | retreg3 |
| XM_026916473.2 | mRNA | downstream | 149219 | 4712873 ~ 4721468 (+) | False | psmc3ip |
| TU242670 | other | upstream | 577124 | 3966758 ~ 3986284 (+) | True | limd2 |
| TU242671 | other | upstream | 577124 | 3966758 ~ 3986284 (+) | False | limd2 |
| TU242672 | other | upstream | 577124 | 3966758 ~ 3986284 (+) | False | limd2 |
| TU242673 | other | upstream | 577124 | 3966758 ~ 3986284 (+) | False | limd2 |
| trnae-cuc_26 | other | upstream | 592158 | 3971179 ~ 3971250 (+) | True | trnae-cuc_26 |
| XR_003402913.2 | other | downstream | 149219 | 4712873 ~ 4721468 (+) | True | psmc3ip |
| XR_003402967.1 | other | downstream | 526544 | 5090198 ~ 5090283 (+) | True | LOC113528651 |
| XR_003402964.1 | other | downstream | 526866 | 5090520 ~ 5090604 (+) | True | LOC113528648 |
| XR_003402966.1 | other | downstream | 527178 | 5090832 ~ 5090916 (+) | True | LOC113528650 |
| XR_003402965.1 | other | downstream | 527594 | 5091248 ~ 5091332 (+) | True | LOC113528649 |
