Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004578179.1 |
| length | 184 |
| RNA type | ncRNA |
| GC content | 0.48 |
| exon number | 3 |
| gene id | LOC117597343 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 6323043 ~ 6324680 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU92334 | lncRNA | downstream | 33142 | 6289797 ~ 6290011 (-) | True | G77799 |
| TU92332 | lncRNA | downstream | 41729 | 6280999 ~ 6281424 (-) | True | G77797 |
| XR_004578155.1 | lncRNA | downstream | 68003 | 6253870 ~ 6255150 (-) | True | LOC117597312 |
| TU92312 | lncRNA | downstream | 75707 | 6239066 ~ 6247446 (-) | True | LOC117597406 |
| TU92315 | lncRNA | downstream | 75963 | 6238955 ~ 6247190 (-) | False | LOC117597406 |
| TU92383 | lncRNA | upstream | 1419 | 6326099 ~ 6328085 (-) | True | G77840 |
| XR_004578288.1 | lncRNA | upstream | 208770 | 6533450 ~ 6536271 (-) | True | LOC117597449 |
| TU92638 | lncRNA | upstream | 268461 | 6593141 ~ 6615660 (-) | True | G78058 |
| TU92799 | lncRNA | upstream | 752741 | 7077421 ~ 7107392 (-) | True | G78172 |
| TU92833 | lncRNA | upstream | 860753 | 7185433 ~ 7185732 (-) | True | G78203 |
| XM_034304748.1 | mRNA | downstream | 69807 | 6246828 ~ 6253346 (-) | False | LOC117597406 |
| XM_034304334.1 | mRNA | downstream | 79441 | 6225854 ~ 6243712 (-) | True | LOC113534858 |
| XM_034304335.1 | mRNA | downstream | 91961 | 6228208 ~ 6231192 (-) | True | LOC117597339 |
| XM_026928149.2 | mRNA | downstream | 841178 | 5440481 ~ 5481975 (-) | False | arhgap15 |
| XM_026928148.2 | mRNA | downstream | 841178 | 5440481 ~ 5481975 (-) | True | arhgap15 |
| XM_026928040.2 | mRNA | upstream | 83481 | 6408161 ~ 6431124 (-) | True | mcf2lb |
| XM_026928038.2 | mRNA | upstream | 83481 | 6408161 ~ 6430896 (-) | False | mcf2lb |
| XM_034304554.1 | mRNA | upstream | 83481 | 6408161 ~ 6426420 (-) | False | mcf2lb |
| XM_026928041.2 | mRNA | upstream | 83481 | 6408161 ~ 6426419 (-) | False | mcf2lb |
| XM_026928037.2 | mRNA | upstream | 83481 | 6408161 ~ 6426419 (-) | False | mcf2lb |
| TU92001 | other | downstream | 983520 | 5331584 ~ 5339633 (-) | False | LOC113534947 |
| TU91765 | other | downstream | 1478274 | 4839960 ~ 4844879 (-) | True | G77283 |
| TU90967 | other | downstream | 2507117 | 3813479 ~ 3816036 (-) | False | faima |
| trnas-cga | other | downstream | 3383751 | 2939321 ~ 2939402 (-) | True | trnas-cga |
| XR_004578243.1 | other | downstream | 3517290 | 2802887 ~ 2805863 (-) | False | LOC113541352 |
| TU92645 | other | upstream | 204366 | 6529046 ~ 6564571 (-) | False | G78058 |
| TU92652 | other | upstream | 204366 | 6529046 ~ 6565037 (-) | False | G78058 |
| TU92666 | other | upstream | 219438 | 6544118 ~ 6545953 (-) | False | LOC113534870 |
| TU92785 | other | upstream | 719107 | 7043787 ~ 7046809 (-) | True | G78159 |
| TU93319 | other | upstream | 1420046 | 7744726 ~ 7747638 (-) | True | G78626 |
