Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU94360 |
| length | 330 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G79488 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 9158945 ~ 9159274 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU94384 | lncRNA | downstream | 9752 | 9148897 ~ 9149193 (-) | True | G79507 |
| TU94366 | lncRNA | downstream | 10298 | 9100787 ~ 9148647 (-) | False | cnga4 |
| TU94370 | lncRNA | downstream | 53365 | 9104665 ~ 9105580 (-) | False | cnga4 |
| TU94275 | lncRNA | downstream | 115519 | 9042748 ~ 9043426 (-) | True | G79414 |
| TU94209 | lncRNA | downstream | 224530 | 8933945 ~ 8934415 (-) | True | G79360 |
| XR_003402715.2 | lncRNA | upstream | 22393 | 9181667 ~ 9194123 (-) | False | LOC113525875 |
| TU94352 | lncRNA | upstream | 32071 | 9191345 ~ 9195988 (-) | True | LOC113525875 |
| TU94406 | lncRNA | upstream | 52831 | 9212105 ~ 9214216 (-) | True | G79529 |
| TU94427 | lncRNA | upstream | 96114 | 9255388 ~ 9256891 (-) | True | G79541 |
| TU94445 | lncRNA | upstream | 135329 | 9294603 ~ 9294803 (-) | True | G79553 |
| XM_026913104.2 | mRNA | downstream | 51636 | 9099536 ~ 9107309 (-) | True | cnga4 |
| XM_026913011.2 | mRNA | downstream | 72076 | 9083482 ~ 9086869 (-) | True | nhlh2 |
| XM_034304200.1 | mRNA | downstream | 81595 | 9053522 ~ 9077350 (-) | False | vangl1 |
| XM_034304425.1 | mRNA | upstream | 1134 | 9160408 ~ 9174609 (-) | False | ankrd50l |
| XM_026912490.2 | mRNA | upstream | 1134 | 9160408 ~ 9174609 (-) | False | ankrd50l |
| XM_034304426.1 | mRNA | upstream | 1134 | 9160408 ~ 9174194 (-) | False | ankrd50l |
| XM_034304424.1 | mRNA | upstream | 1134 | 9160408 ~ 9174194 (-) | False | ankrd50l |
| XM_034304423.1 | mRNA | upstream | 1134 | 9160408 ~ 9174194 (-) | True | ankrd50l |
| TU94246 | other | downstream | 139497 | 8996783 ~ 9019448 (-) | True | G79388 |
| TU94190 | other | downstream | 299546 | 8857819 ~ 8859399 (-) | False | LOC117597331 |
| TU94195 | other | downstream | 386516 | 8771466 ~ 8772429 (-) | True | G79349 |
| TU94039 | other | downstream | 493366 | 8664690 ~ 8665579 (-) | True | G79221 |
| TU93319 | other | downstream | 1411307 | 7744726 ~ 7747638 (-) | True | G78626 |
| TU94713 | other | upstream | 369030 | 9528304 ~ 9531668 (-) | False | LOC113525856 |
| TU94711 | other | upstream | 369588 | 9528862 ~ 9531668 (-) | False | LOC113525856 |
| TU94712 | other | upstream | 369588 | 9528862 ~ 9531668 (-) | False | LOC113525856 |
| TU94755 | other | upstream | 409281 | 9568555 ~ 9569120 (-) | True | G79826 |
| TU94731 | other | upstream | 494520 | 9653794 ~ 9654455 (-) | False | si:dkey-83m22.7 |
