Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU222712 |
| length | 467 |
| RNA type | TUCP |
| GC content | 0.48 |
| exon number | 4 |
| gene id | polr2l |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 26185862 ~ 26212115 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU222731 | lncRNA | upstream | 43767 | 26153529 ~ 26166792 (+) | True | G188179 |
| TU222738 | lncRNA | upstream | 45803 | 26161314 ~ 26164756 (+) | True | G188184 |
| TU222739 | lncRNA | upstream | 45803 | 26162308 ~ 26164756 (+) | False | G188184 |
| TU222720 | lncRNA | upstream | 100711 | 26109623 ~ 26109848 (+) | True | G188168 |
| TU222672 | lncRNA | upstream | 217156 | 25988798 ~ 25993403 (+) | True | G188127 |
| TU222764 | lncRNA | downstream | 6822 | 26218931 ~ 26222921 (+) | True | G188202 |
| TU222766 | lncRNA | downstream | 8326 | 26220435 ~ 26222921 (+) | False | G188202 |
| XR_004579054.1 | lncRNA | downstream | 207497 | 26419606 ~ 26420373 (+) | True | LOC117598393 |
| XR_004579058.1 | lncRNA | downstream | 208265 | 26420374 ~ 26421499 (+) | True | LOC117598395 |
| TU223002 | lncRNA | downstream | 215259 | 26427368 ~ 26575308 (+) | False | G188395 |
| XM_034308615.1 | mRNA | upstream | 71940 | 26099524 ~ 26138619 (+) | False | helz2a |
| XM_026910023.2 | mRNA | upstream | 71940 | 26119408 ~ 26138619 (+) | True | helz2a |
| XM_034308692.1 | mRNA | upstream | 115421 | 26083657 ~ 26095138 (+) | True | slc38a7 |
| XM_034308780.1 | mRNA | upstream | 147903 | 26039386 ~ 26062656 (+) | True | LOC113523928 |
| XM_026909993.2 | mRNA | upstream | 279970 | 25924180 ~ 25930589 (+) | True | tollip |
| XM_026910859.2 | mRNA | downstream | 11708 | 26223817 ~ 26227916 (+) | True | LOC113524556 |
| XM_034308614.1 | mRNA | downstream | 28963 | 26241072 ~ 26244720 (+) | True | LOC117598406 |
| XM_026910874.2 | mRNA | downstream | 48421 | 26260530 ~ 26352035 (+) | True | syt7b |
| XM_026910875.2 | mRNA | downstream | 48422 | 26260531 ~ 26352035 (+) | False | syt7b |
| XM_026910876.2 | mRNA | downstream | 48423 | 26260532 ~ 26352035 (+) | False | syt7b |
| TU222716 | other | upstream | 549 | 26206942 ~ 26210010 (+) | True | G188164 |
| TU222375 | other | upstream | 617056 | 25531745 ~ 25593503 (+) | False | LOC113523924 |
| trnar-acg_9 | other | upstream | 704064 | 25506423 ~ 25506495 (+) | True | trnar-acg_9 |
| TU221326 | other | upstream | 1999834 | 24207893 ~ 24210725 (+) | True | glrx2 |
| TU221328 | other | upstream | 1999834 | 24207893 ~ 24210725 (+) | False | glrx2 |
| TU222884 | other | downstream | 48568 | 26260677 ~ 26318575 (+) | False | syt7b |
