Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU26509 |
| length | 237 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G22231 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 5863865 ~ 5864101 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU26507 | lncRNA | downstream | 68718 | 5794942 ~ 5795147 (-) | True | G22229 |
| TU26474 | lncRNA | downstream | 128169 | 5730446 ~ 5735696 (-) | True | G22199 |
| TU26494 | lncRNA | downstream | 147815 | 5715840 ~ 5716050 (-) | True | G22219 |
| TU26489 | lncRNA | downstream | 152627 | 5711010 ~ 5711238 (-) | True | G22214 |
| TU26476 | lncRNA | downstream | 161111 | 5701617 ~ 5702754 (-) | True | G22201 |
| TU26515 | lncRNA | upstream | 6399 | 5870500 ~ 5870701 (-) | True | G22237 |
| XR_004577038.1 | lncRNA | upstream | 25181 | 5889282 ~ 5890832 (-) | True | LOC117595835 |
| TU26607 | lncRNA | upstream | 92538 | 5956639 ~ 5965183 (-) | True | blcap |
| TU26606 | lncRNA | upstream | 92925 | 5957026 ~ 5965183 (-) | False | blcap |
| TU26608 | lncRNA | upstream | 92925 | 5957026 ~ 5965183 (-) | False | blcap |
| XM_026919444.2 | mRNA | downstream | 432 | 5761737 ~ 5863433 (-) | False | chd6 |
| XM_026919428.2 | mRNA | downstream | 432 | 5761737 ~ 5863433 (-) | True | chd6 |
| XM_026919418.2 | mRNA | downstream | 432 | 5761737 ~ 5863433 (-) | False | chd6 |
| XM_034298801.1 | mRNA | downstream | 432 | 5761737 ~ 5863433 (-) | False | chd6 |
| XM_026919453.2 | mRNA | downstream | 831 | 5761737 ~ 5863034 (-) | False | chd6 |
| XM_034300835.1 | mRNA | upstream | 92915 | 5957016 ~ 5965143 (-) | False | blcap |
| XM_026920539.2 | mRNA | upstream | 92915 | 5957016 ~ 5965136 (-) | False | blcap |
| XM_026937756.2 | mRNA | upstream | 118483 | 5982584 ~ 5989372 (-) | True | psmf1 |
| XM_026927486.2 | mRNA | upstream | 191721 | 6055822 ~ 6118568 (-) | True | rims4 |
| XM_034300540.1 | mRNA | upstream | 209934 | 6074035 ~ 6076877 (-) | True | LOC117596222 |
| TU26421 | other | downstream | 327805 | 5534124 ~ 5536060 (-) | False | romo1 |
| TU26420 | other | downstream | 327858 | 5534124 ~ 5536007 (-) | False | romo1 |
| XR_003403149.2 | other | downstream | 662653 | 5111462 ~ 5201212 (-) | False | LOC113530384 |
| XR_004577391.1 | other | upstream | 209934 | 6074035 ~ 6076877 (-) | False | LOC117596222 |
| TU26888 | other | upstream | 615301 | 6479402 ~ 6480011 (-) | True | G22591 |
| XR_004580309.1 | other | upstream | 2398518 | 8262619 ~ 8265229 (-) | False | mitfa |
| TU28034 | other | upstream | 2616950 | 8481051 ~ 8484029 (-) | False | tcta |
| TU28035 | other | upstream | 2616950 | 8481051 ~ 8484181 (-) | False | tcta |
