Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU30803 |
| length | 382 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G26082 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 12269874 ~ 12270255 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU30798 | lncRNA | downstream | 62 | 12264692 ~ 12269812 (-) | True | G26077 |
| TU30538 | lncRNA | downstream | 55072 | 12213764 ~ 12214802 (-) | False | LOC117596184 |
| XR_004577361.1 | lncRNA | downstream | 55103 | 12212988 ~ 12214771 (-) | True | LOC117596184 |
| TU30403 | lncRNA | downstream | 332071 | 11937615 ~ 11937803 (-) | True | G25723 |
| TU30232 | lncRNA | downstream | 497584 | 11752487 ~ 11772290 (-) | False | G25575 |
| TU30806 | lncRNA | upstream | 4980 | 12275235 ~ 12276054 (-) | True | G26085 |
| TU30844 | lncRNA | upstream | 204892 | 12475147 ~ 12485954 (-) | True | G26117 |
| TU30851 | lncRNA | upstream | 231443 | 12501698 ~ 12502087 (-) | True | G26124 |
| XR_003403116.2 | lncRNA | upstream | 282498 | 12552753 ~ 12553617 (-) | True | LOC113530116 |
| TU30861 | lncRNA | upstream | 287345 | 12557600 ~ 12558161 (-) | True | G26134 |
| XM_026921794.2 | mRNA | downstream | 25623 | 12223244 ~ 12244251 (-) | True | camk1a |
| XM_026918597.2 | mRNA | downstream | 144215 | 12043629 ~ 12125659 (-) | True | ca16b |
| XM_026918600.2 | mRNA | downstream | 144216 | 12043629 ~ 12125658 (-) | False | ca16b |
| XM_034313227.1 | mRNA | downstream | 229239 | 12035632 ~ 12040635 (-) | False | tardbp |
| XM_026922590.2 | mRNA | upstream | 6363 | 12276618 ~ 12303048 (-) | True | kcnb1 |
| XM_026926191.2 | mRNA | upstream | 35194 | 12305449 ~ 12356720 (-) | True | ptgis |
| XM_026926185.2 | mRNA | upstream | 35194 | 12305449 ~ 12314745 (-) | False | ptgis |
| XM_026918407.2 | mRNA | upstream | 161955 | 12432210 ~ 12438064 (-) | True | tarbp2 |
| XM_026918415.2 | mRNA | upstream | 162935 | 12433190 ~ 12438065 (-) | False | tarbp2 |
| TU29342 | other | downstream | 1779579 | 10489293 ~ 10490295 (-) | True | G24760 |
| TU29080 | other | downstream | 2401596 | 9863367 ~ 9868278 (-) | False | G24516 |
| TU28828 | other | downstream | 2550904 | 9715527 ~ 9718970 (-) | False | tnnt2b |
| TU28673 | other | downstream | 2828064 | 9435563 ~ 9441810 (-) | False | tusc2a |
| TU28036 | other | downstream | 3785760 | 8481051 ~ 8484114 (-) | False | tcta |
| XR_003403751.2 | other | upstream | 968449 | 13238704 ~ 13238806 (-) | True | LOC113537313 |
| TU31648 | other | upstream | 1228350 | 13498605 ~ 13499984 (-) | False | slc5a8l |
| TU31814 | other | upstream | 1362007 | 13632262 ~ 13634652 (-) | False | rps26l |
| XR_004579719.1 | other | upstream | 1603459 | 13873714 ~ 13907189 (-) | False | lhfpl4a |
| TU31994 | other | upstream | 1780146 | 14050401 ~ 14058445 (-) | True | G27107 |
