Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU424496 |
| length | 461 |
| lncRNA type | inter_gene |
| GC content | 0.60 |
| exon number | 2 |
| gene id | G358289 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047619.1 |
| NCBI id | CM018565.1 |
| chromosome length | 19570078 |
| location | 135381 ~ 138331 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU424498 | lncRNA | upstream | 820 | 133431 ~ 134561 (+) | True | G358290 |
| TU424492 | lncRNA | upstream | 69454 | 65658 ~ 65927 (+) | True | G358286 |
| TU424488 | lncRNA | upstream | 74486 | 60658 ~ 60895 (+) | True | G358282 |
| TU424487 | lncRNA | upstream | 74827 | 60141 ~ 60554 (+) | True | G358281 |
| TU424483 | lncRNA | upstream | 89785 | 44768 ~ 45596 (+) | True | G358277 |
| TU424526 | lncRNA | downstream | 40695 | 179026 ~ 179314 (+) | True | G358304 |
| TU424527 | lncRNA | downstream | 41607 | 179938 ~ 180150 (+) | True | G358305 |
| TU424539 | lncRNA | downstream | 135123 | 273454 ~ 274623 (+) | True | LOC113525132 |
| XR_003402628.2 | lncRNA | downstream | 135133 | 273464 ~ 274515 (+) | False | LOC113525132 |
| TU424536 | lncRNA | downstream | 145912 | 284243 ~ 286527 (+) | True | G358312 |
| XM_026911593.2 | mRNA | downstream | 161342 | 299673 ~ 306763 (+) | True | LOC113525130 |
| XM_026911594.2 | mRNA | downstream | 161778 | 300109 ~ 306763 (+) | False | LOC113525130 |
| XM_026911574.2 | mRNA | downstream | 182205 | 320536 ~ 323330 (+) | True | plekhf1 |
| XM_026911576.2 | mRNA | downstream | 192656 | 330987 ~ 338641 (+) | True | si:ch211-260e23.9 |
| XM_034299453.1 | mRNA | downstream | 205731 | 344062 ~ 351768 (+) | True | ccne1 |
| TU424532 | other | downstream | 205787 | 344118 ~ 348676 (+) | False | ccne1 |
| TU424577 | other | downstream | 210438 | 348769 ~ 351769 (+) | False | ccne1 |
| TU424578 | other | downstream | 210438 | 348769 ~ 351769 (+) | False | ccne1 |
| TU424579 | other | downstream | 210438 | 348769 ~ 351769 (+) | False | ccne1 |
| TU424567 | other | downstream | 288565 | 426896 ~ 438886 (+) | False | cmtm4 |
