RNA id: AMCG00004335



Basic Information


Item Value
RNA id AMCG00004335
length 312
RNA type mRNA
GC content 0.49
exon number 2
gene id AMCG00004335
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 43526980 ~ 43534658 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGATTTCTCATCTGCTCTTCATCAGGGTCATTAGCATATCCTCTGGGCTGATGAGGGGCAAAATCATTCTGGAGCTGCTGCTGTCCCTGGCGCTGGGCCAGGTGCTGTCACTACTGATTTGCGGCATTGGGCTGACGAGCAAGTACTTGGCAGATGATTTCCAAGCCAACACTCCTGTCTTTCAAAGTTTTCTTAACTACATCCTTCTGTTCCTGGTCTACACCACCACATTAGCAGTGAGACAAGGTATGAACCTGACTGCCGACTATGAGAGGTGCAGATTGGCAAAAACACCTGCAGGCTACGCGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU9148 lncRNA upstream 180021 43346350 ~ 43346959 (+) True G7441
TU9117 lncRNA upstream 289327 43235818 ~ 43237653 (+) True G7418
TU8944 lncRNA upstream 1051094 42475576 ~ 42475886 (+) True G7293
TU8939 lncRNA upstream 1147019 42376625 ~ 42379961 (+) True G7288
TU8928 lncRNA upstream 1161326 42364868 ~ 42365654 (+) True G7278
TU9208 lncRNA downstream 57092 43591750 ~ 43595078 (+) True G7485
TU9307 lncRNA downstream 543687 44078345 ~ 44081355 (+) False G7569
TU9305 lncRNA downstream 548440 44083098 ~ 44088037 (+) True G7569
TU9326 lncRNA downstream 801793 44336451 ~ 44336681 (+) True G7584
TU9368 lncRNA downstream 995682 44530340 ~ 44543143 (+) True G7614
AMCG00004332 mRNA upstream 115884 43380670 ~ 43411096 (+) True AMCG00004332
AMCG00004329 mRNA upstream 164293 43350779 ~ 43362687 (+) True AMCG00004329
AMCG00004330 mRNA upstream 188120 43329372 ~ 43338860 (+) True AMCG00004330
AMCG00004331 mRNA upstream 209572 43295652 ~ 43317408 (+) True AMCG00004331
AMCG00004327 mRNA upstream 292687 43216106 ~ 43234293 (+) True AMCG00004327
AMCG00004342 mRNA downstream 76123 43610781 ~ 43611095 (+) True AMCG00004342
AMCG00004338 mRNA downstream 90957 43625615 ~ 43631896 (+) True AMCG00004338
AMCG00004343 mRNA downstream 136362 43671020 ~ 43721979 (+) True AMCG00004343
AMCG00004346 mRNA downstream 260563 43795221 ~ 43798475 (+) True AMCG00004346
AMCG00004351 mRNA downstream 875941 44410599 ~ 44411051 (+) True AMCG00004351
TU9000 other upstream 835871 42688779 ~ 42691109 (+) True G7329
TU8899 other upstream 1310618 42212510 ~ 42216362 (+) False AMCG00004304
TU8679 other upstream 2019749 41459576 ~ 41507231 (+) True G7094
TU7800 other upstream 6526822 36999357 ~ 37000158 (+) True G6369
TU7756 other upstream 6635234 36861547 ~ 36891746 (+) True G6328
TU9559 other downstream 2427352 45962010 ~ 45968306 (+) True AMCG00004380
TU9841 other downstream 4612230 48146888 ~ 48147156 (+) True G7999
TU9962 other downstream 5397792 48932450 ~ 48934095 (+) True G8099
TU10340 other downstream 6616606 50151264 ~ 50157719 (+) True G8377
TU10527 other downstream 7209133 50743791 ~ 50753349 (+) False AMCG00004477

Expression Profile