RNA id: AMCG00005366



Basic Information


Item Value
RNA id AMCG00005366
length 735
RNA type mRNA
GC content 0.62
exon number 6
gene id AMCG00005366
representative True

Chromosome Information


Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 22123782 ~ 22130249 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCAGAACCCCTCCAGGACGTCCGCAGCCCCCCCACCACGGCAGGACTGCGCCTCCAGCTGCCCCCACTGCCCCAAGATGCGGACCCCCTGCCCAGGGAGATATGCGGTGGACCCCTGCGGCTGCTGCCGGCACTGTGCCCGGCAGAGAGCAGAGGTGTGCGGGGGCCCGTCTTGGCAGTATGGCTACTGTGACACGTACCTGACCTGCGCCAGCATCAACGACACCACCCCCATCAAGATCCCCAACACCGGCGTCTGCAAAGAGCTGCCCGGGGTGAAGCGGGACCCATGGGAGGACGATCTGTGCCCGTGGGTTTGGGGCTGCGAATTTATGGACTACGATCCCACTCTTCAgcagagtgagacagagagtaAGCCTGTGCCGTGTACTCACCAGAGTTGCCCGACCAAGACGGTGCCGTCCTGCCCGCTGGACTCCTTCCTGACTAAAGCCTACACGCCTGTAGGGGACTGCTGCCCCCTGGTGCCCAGCTTCTGCACCTGTGACTTTAAGCGCTGCGCCAGCCCCTCCTGCCCACCCGGTTGGCACAGCCAGCTCATCTCCAAGGGCACAGGGGTGAGGTCacagaaggaggaggaagaggaggaggaagaggaagaggacagTGAGACGCTCACTCTGGAGGACagaccaggagagagagagagaaggagaaggagagagagaagtgaaagGGAAAGAAGGAGCTTCTACAGCCGACACTGTATGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU185037 lncRNA upstream 36438 22081644 ~ 22087344 (+) True G147066
TU184988 lncRNA upstream 166737 21956601 ~ 21957045 (+) True G147027
TU184985 lncRNA upstream 173195 21950328 ~ 21950587 (+) True G147024
TU184983 lncRNA upstream 175164 21948086 ~ 21948618 (+) True G147022
TU184849 lncRNA upstream 378331 21744879 ~ 21745451 (+) True G146928
AMCG00005364 mRNA upstream 811 22116489 ~ 22122971 (+) True AMCG00005364
AMCG00005357 mRNA upstream 62315 22060209 ~ 22061467 (+) True AMCG00005357
AMCG00005358 mRNA upstream 92684 22024523 ~ 22031098 (+) True AMCG00005358
AMCG00005356 mRNA upstream 99294 22020862 ~ 22024488 (+) True AMCG00005356
AMCG00005351 mRNA upstream 154116 21966858 ~ 21969666 (+) True AMCG00005351
AMCG00005370 mRNA downstream 36 22130285 ~ 22132482 (+) True AMCG00005370
AMCG00005365 mRNA downstream 2316 22132565 ~ 22145610 (+) True AMCG00005365
AMCG00005381 mRNA downstream 45237 22175486 ~ 22178376 (+) True AMCG00005381
AMCG00005378 mRNA downstream 51415 22181664 ~ 22198741 (+) True AMCG00005378
AMCG00005376 mRNA downstream 69936 22200185 ~ 22211145 (+) True AMCG00005376
TU184992 other upstream 139638 21957440 ~ 21984144 (+) True G147029
TU184996 other upstream 154090 21968302 ~ 21969692 (+) False AMCG00005351
TU184986 other upstream 170900 21952569 ~ 21952882 (+) True G147025
TU184980 other upstream 175791 21945558 ~ 21947991 (+) True G147021
TU184903 other upstream 236337 21885270 ~ 21887445 (+) False AMCG00005345
TU185050 other downstream 8938 22139187 ~ 22144833 (+) False AMCG00005365
TU185051 other downstream 8938 22139187 ~ 22144833 (+) False AMCG00005365

Expression Profile