RNA id: AMCG00011273


Basic Information

Item Value
RNA id AMCG00011273
length 405
RNA type mRNA
GC content 0.60
exon number 3
gene id AMCG00011273
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 16198120 ~ 16199539 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCCTCAGCTGAATAGCGGCGGAGGGGATGATCTCGGCGCTAACGACGAGATGATCTCCTTCAAGGACGAGGGGGAGCAGGACGAGAAGATCCCGGAGAACGCGCTGACCGAGCGGGACCTGGCGGACCTGAAGTCGTCCCTGGTACACGAGTCGGAGATCCACCAGGGCGCTGCGGCGGCGGCGGACCCGGGGGTGAGAGAGCCGCAGCCGCGCCGTGGCGGATCCGCCATCAGACGTGCACAGCAGGAGGAGCACAGGCTTTACGCGGACAAGCACAGAGACCATCTGGAGGACGTGACTAAACGTCAAGATGCAGGAATGTACAAAGCTTCTGCCTATTCTGGATACCCATTTCTGATGCTGCCTGACTCGTACATCCCTAATGGATCTATGTCTCCATCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131897 lncRNA downstream 56782 16139099 ~ 16141338 (-) True G105454
TU131884 lncRNA downstream 149598 16043429 ~ 16048522 (-) False AMCG00011271
TU131866 lncRNA downstream 163097 16032251 ~ 16035023 (-) True G105427
TU131742 lncRNA downstream 628996 15535370 ~ 15569124 (-) True G105326
TU131703 lncRNA downstream 801728 15391732 ~ 15396392 (-) True G105298
TU131922 lncRNA upstream 36589 16236128 ~ 16237685 (-) True G105473
TU131928 lncRNA upstream 45157 16244696 ~ 16247301 (-) True G105479
TU132017 lncRNA upstream 455708 16655247 ~ 16725153 (-) True G105553
TU132092 lncRNA upstream 694421 16893960 ~ 16895074 (-) True G105607
TU132221 lncRNA upstream 1110251 17309790 ~ 17312068 (-) True G105701
AMCG00011274 mRNA downstream 21054 16149736 ~ 16177066 (-) True AMCG00011274
AMCG00011272 mRNA downstream 83161 16110270 ~ 16114959 (-) True AMCG00011272
AMCG00011271 mRNA downstream 99941 16043371 ~ 16098179 (-) True AMCG00011271
AMCG00011264 mRNA downstream 173371 16004972 ~ 16024749 (-) True AMCG00011264
AMCG00011266 mRNA downstream 193730 16000144 ~ 16004390 (-) True AMCG00011266
AMCG00011279 mRNA upstream 341118 16540657 ~ 16579592 (-) True AMCG00011279
AMCG00011281 mRNA upstream 437757 16637296 ~ 16664404 (-) True AMCG00011281
AMCG00011283 mRNA upstream 465374 16664913 ~ 16699921 (-) True AMCG00011283
AMCG00011284 mRNA upstream 546058 16745597 ~ 16746212 (-) True AMCG00011284
AMCG00011282 mRNA upstream 554117 16753656 ~ 16764495 (-) True AMCG00011282
TU131862 other downstream 224248 15963338 ~ 15973872 (-) False AMCG00011259
TU131861 other downstream 224248 15963452 ~ 15973872 (-) False AMCG00011259
TU131737 other downstream 695987 15499534 ~ 15502133 (-) True AMCG00011251
TU131692 other downstream 824941 15370402 ~ 15373179 (-) True G105290
TU131409 other downstream 2129559 14067215 ~ 14068561 (-) True G105050
TU132119 other upstream 758642 16958181 ~ 16961069 (-) False AMCG00011290
TU132307 other upstream 1530412 17729951 ~ 17733068 (-) False AMCG00011313
TU132311 other upstream 1551714 17751253 ~ 17751502 (-) True G105770
TU132338 other upstream 1800129 17999668 ~ 18000445 (-) True G105793
TU132382 other upstream 1984945 18184484 ~ 18191195 (-) True AMCG00011316

Expression Profile