Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00009308 |
| length | 609 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 4 |
| gene id | XLOC_004699 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 22576404 ~ 22618080 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0051016 | barbed-end actin filament capping | biological_process |
| GO:0051015 | actin filament binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-8541 | Predicted to enable actin filament binding activity. Predicted to be involved in actin filament severing and actin polymerization or depolymerization. Predicted to act upstream of or within barbed-end actin filament capping. Predicted to be located in several cellular components, including lamellipodium; melanosome; and ruffle. Orthologous to human CAPG (capping actin protein, gelsolin like). |
| ensembl_id | ENSDART00000171725 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00009303 | lncRNA | upstream | 153524 | 22423953 ~ 22427055 (+) | False | XLOC_004697 |
| TCONS_00010927 | lncRNA | upstream | 275738 | 22289980 ~ 22304841 (+) | True | XLOC_004696 |
| TCONS_00010734 | lncRNA | upstream | 321181 | 22258962 ~ 22259398 (+) | False | XLOC_004696 |
| TCONS_00010926 | lncRNA | upstream | 560809 | 22017946 ~ 22019770 (+) | True | XLOC_004695 |
| TCONS_00010925 | lncRNA | upstream | 781183 | 21790979 ~ 21799396 (+) | False | XLOC_004694 |
| TCONS_00010735 | lncRNA | downstream | 19321 | 22618388 ~ 22619122 (+) | True | XLOC_004701 |
| TCONS_00010928 | lncRNA | downstream | 438380 | 23037447 ~ 23040091 (+) | True | XLOC_004707 |
| TCONS_00010929 | lncRNA | downstream | 855362 | 23454429 ~ 23605722 (+) | False | XLOC_004711 |
| TCONS_00010930 | lncRNA | downstream | 855391 | 23454458 ~ 23605722 (+) | False | XLOC_004711 |
| TCONS_00010931 | lncRNA | downstream | 855461 | 23454528 ~ 23469341 (+) | False | XLOC_004711 |
| TCONS_00009305 | mRNA | upstream | 7282 | 22560067 ~ 22573297 (+) | True | XLOC_004698 |
| TCONS_00009301 | mRNA | upstream | 135518 | 22404108 ~ 22445061 (+) | False | XLOC_004697 |
| TCONS_00009302 | mRNA | upstream | 136192 | 22407852 ~ 22444387 (+) | False | XLOC_004697 |
| TCONS_00009300 | mRNA | upstream | 275738 | 22258962 ~ 22304841 (+) | False | XLOC_004696 |
| TCONS_00009298 | mRNA | upstream | 832571 | 21697540 ~ 21748008 (+) | True | XLOC_004693 |
| TCONS_00009311 | mRNA | downstream | 8694 | 22607761 ~ 22618080 (+) | True | XLOC_004699 |
| TCONS_00009312 | mRNA | downstream | 29637 | 22628704 ~ 22645215 (+) | True | XLOC_004702 |
| TCONS_00009314 | mRNA | downstream | 58858 | 22657925 ~ 22664563 (+) | True | XLOC_004703 |
| TCONS_00009315 | mRNA | downstream | 73256 | 22672323 ~ 22678549 (+) | False | XLOC_004704 |
| TCONS_00009316 | mRNA | downstream | 73258 | 22672325 ~ 22678549 (+) | False | XLOC_004704 |
| TCONS_00009307 | other | upstream | 2049 | 22578404 ~ 22578530 (+) | True | XLOC_004700 |
| TCONS_00009304 | other | upstream | 135807 | 22443629 ~ 22444772 (+) | True | XLOC_004697 |
| TCONS_00009299 | other | upstream | 786463 | 21794002 ~ 21794116 (+) | True | XLOC_004694 |
| TCONS_00009295 | other | upstream | 1143121 | 21437346 ~ 21437458 (+) | True | XLOC_004691 |
| TCONS_00009286 | other | upstream | 1888566 | 20691358 ~ 20692013 (+) | False | XLOC_004688 |
| TCONS_00009313 | other | downstream | 58856 | 22657923 ~ 22661380 (+) | False | XLOC_004703 |
| TCONS_00009319 | other | downstream | 78886 | 22677953 ~ 22745783 (+) | False | XLOC_004704 |
| TCONS_00009330 | other | downstream | 322410 | 22921477 ~ 22932021 (+) | False | XLOC_004706 |
| TCONS_00009332 | other | downstream | 511096 | 23110163 ~ 23110277 (+) | True | XLOC_004708 |
| TCONS_00009336 | other | downstream | 978199 | 23577266 ~ 23577391 (+) | True | XLOC_004712 |
