Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014635 |
| length | 959 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 3 |
| gene id | AMCG00014635 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 24382767 ~ 24385815 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0031225 | anchored component of membrane | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0043395 | heparan sulfate proteoglycan binding | molecular_function |
| id | description |
|---|---|
| K08111 | GPC5; glypican 5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89505 | lncRNA | upstream | 49470 | 24332431 ~ 24333297 (+) | True | G71596 |
| TU89493 | lncRNA | upstream | 474118 | 23908385 ~ 23908649 (+) | True | G71584 |
| TU89490 | lncRNA | upstream | 677333 | 23705163 ~ 23705434 (+) | True | G71581 |
| TU89482 | lncRNA | upstream | 785444 | 23597118 ~ 23597323 (+) | True | G71574 |
| TU89463 | lncRNA | upstream | 1017765 | 23364760 ~ 23365002 (+) | True | G71557 |
| TU89508 | lncRNA | downstream | 137830 | 24523645 ~ 24532961 (+) | True | G71598 |
| TU89583 | lncRNA | downstream | 696844 | 25082659 ~ 25082878 (+) | True | G71662 |
| TU89593 | lncRNA | downstream | 723341 | 25109156 ~ 25109378 (+) | True | G71670 |
| TU89672 | lncRNA | downstream | 1147527 | 25533342 ~ 25534154 (+) | True | G71725 |
| TU89720 | lncRNA | downstream | 1319643 | 25705458 ~ 25762742 (+) | True | G71763 |
| AMCG00014632 | mRNA | upstream | 2118767 | 22247781 ~ 22264000 (+) | True | AMCG00014632 |
| AMCG00014624 | mRNA | upstream | 3715587 | 20646339 ~ 20667180 (+) | True | AMCG00014624 |
| AMCG00014619 | mRNA | upstream | 4309697 | 20024521 ~ 20073070 (+) | True | AMCG00014619 |
| AMCG00014618 | mRNA | upstream | 4361073 | 19959589 ~ 20021694 (+) | True | AMCG00014618 |
| AMCG00014617 | mRNA | upstream | 4538725 | 19843152 ~ 19844042 (+) | True | AMCG00014617 |
| AMCG00014636 | mRNA | downstream | 306471 | 24692286 ~ 24759297 (+) | True | AMCG00014636 |
| AMCG00014638 | mRNA | downstream | 502718 | 24888533 ~ 24897009 (+) | True | AMCG00014638 |
| AMCG00014637 | mRNA | downstream | 542216 | 24928031 ~ 24937965 (+) | True | AMCG00014637 |
| AMCG00014643 | mRNA | downstream | 701199 | 25087014 ~ 25102638 (+) | True | AMCG00014643 |
| AMCG00014646 | mRNA | downstream | 738279 | 25124094 ~ 25126045 (+) | True | AMCG00014646 |
| TU89430 | other | upstream | 1527121 | 22855342 ~ 22855646 (+) | True | G71525 |
| TU88725 | other | upstream | 6108407 | 18271854 ~ 18274360 (+) | True | G71004 |
| TU88601 | other | upstream | 6934314 | 17403511 ~ 17448453 (+) | False | AMCG00014553 |
| TU88385 | other | upstream | 7913654 | 16465681 ~ 16469113 (+) | False | AMCG00014525 |
| TU88218 | other | upstream | 8249965 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU90165 | other | downstream | 3449688 | 27835503 ~ 27841871 (+) | True | AMCG00014704 |
| TU90175 | other | downstream | 3482888 | 27868703 ~ 27879800 (+) | True | AMCG00014703 |
| TU90214 | other | downstream | 3916558 | 28302373 ~ 28304073 (+) | True | G72175 |
| TU90740 | other | downstream | 5465635 | 29851450 ~ 29851821 (+) | True | G72605 |
| TU90928 | other | downstream | 6378536 | 30764351 ~ 30805741 (+) | False | AMCG00014777 |
