RNA id: AMCG00014636



Basic Information


Item Value
RNA id AMCG00014636
length 423
RNA type mRNA
GC content 0.48
exon number 3
gene id AMCG00014636
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 24692286 ~ 24759297 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atgatgatgatgatgatgaaagAATTTTTCCTGGAGCTCCTAGACAACACGGAGAAGTCCCTCAATGACATGTTTGTGCGGACTTATGGCAAGCTGTACACGCAGAACTCAGAAGTGTTTCAGGATCTGTTCACCGAGCTCAAGCGCTACTACACGGGCGGGAATGTTAACTTGGAGGAGATGTTGAATGACTTCTGGGCCCGGTTGCTGGAGCGAATGTTCCAGCTTTTGAACTCGCAGTATCATTTCACGGACGACTACTTGGAATGTATTAGCAAATACACGGACCAGCTCAAGCCTTTTGGAGATGTGCCCAGAAAACTGAAGGCTCAGGTTACCAGGGCATTCATCGCTGCCCGTACATTTGTCCAGGGACTCACTGTTGGAAGAGAGGTGGCCAACAGAGTATCCAAGGTATTATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU89508 lncRNA upstream 159325 24523645 ~ 24532961 (+) True G71598
TU89505 lncRNA upstream 358989 24332431 ~ 24333297 (+) True G71596
TU89493 lncRNA upstream 783637 23908385 ~ 23908649 (+) True G71584
TU89490 lncRNA upstream 986852 23705163 ~ 23705434 (+) True G71581
TU89482 lncRNA upstream 1094963 23597118 ~ 23597323 (+) True G71574
TU89583 lncRNA downstream 323362 25082659 ~ 25082878 (+) True G71662
TU89593 lncRNA downstream 349859 25109156 ~ 25109378 (+) True G71670
TU89672 lncRNA downstream 774045 25533342 ~ 25534154 (+) True G71725
TU89720 lncRNA downstream 946161 25705458 ~ 25762742 (+) True G71763
TU89729 lncRNA downstream 986506 25745803 ~ 25748408 (+) True G71772
AMCG00014635 mRNA upstream 306471 24382767 ~ 24385815 (+) True AMCG00014635
AMCG00014632 mRNA upstream 2428286 22247781 ~ 22264000 (+) True AMCG00014632
AMCG00014624 mRNA upstream 4025106 20646339 ~ 20667180 (+) True AMCG00014624
AMCG00014619 mRNA upstream 4619216 20024521 ~ 20073070 (+) True AMCG00014619
AMCG00014618 mRNA upstream 4670592 19959589 ~ 20021694 (+) True AMCG00014618
AMCG00014638 mRNA downstream 129236 24888533 ~ 24897009 (+) True AMCG00014638
AMCG00014637 mRNA downstream 168734 24928031 ~ 24937965 (+) True AMCG00014637
AMCG00014643 mRNA downstream 327717 25087014 ~ 25102638 (+) True AMCG00014643
AMCG00014646 mRNA downstream 364797 25124094 ~ 25126045 (+) True AMCG00014646
AMCG00014644 mRNA downstream 390506 25149803 ~ 25163635 (+) True AMCG00014644
TU89430 other upstream 1836640 22855342 ~ 22855646 (+) True G71525
TU88725 other upstream 6417926 18271854 ~ 18274360 (+) True G71004
TU88601 other upstream 7243833 17403511 ~ 17448453 (+) False AMCG00014553
TU88385 other upstream 8223173 16465681 ~ 16469113 (+) False AMCG00014525
TU88218 other upstream 8559484 16129525 ~ 16132802 (+) False AMCG00014508
TU90165 other downstream 3076206 27835503 ~ 27841871 (+) True AMCG00014704
TU90175 other downstream 3109406 27868703 ~ 27879800 (+) True AMCG00014703
TU90214 other downstream 3543076 28302373 ~ 28304073 (+) True G72175
TU90740 other downstream 5092153 29851450 ~ 29851821 (+) True G72605
TU90928 other downstream 6005054 30764351 ~ 30805741 (+) False AMCG00014777

Expression Profile