RNA id: TU89583


Basic Information

Item Value
RNA id TU89583
length 220
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G71662
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 25082659 ~ 25082878 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gaggaggtttgGCAATTTTATGATgtataaaagttttttttttttttttaatttaaattaggctgccaaatattaacatggaatttattttattctccctTTCACTatctaatgcaaagagcttttttcaatactacaacagcaataggtcaataaaggaggaagtgaaacagacaaagggcaaaaatggaagtatcctggaaaacaaacaagatgtgtc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89508 lncRNA upstream 549698 24523645 ~ 24532961 (+) True G71598
TU89505 lncRNA upstream 749362 24332431 ~ 24333297 (+) True G71596
TU89493 lncRNA upstream 1174010 23908385 ~ 23908649 (+) True G71584
TU89490 lncRNA upstream 1377225 23705163 ~ 23705434 (+) True G71581
TU89482 lncRNA upstream 1485336 23597118 ~ 23597323 (+) True G71574
TU89593 lncRNA downstream 26278 25109156 ~ 25109378 (+) True G71670
TU89672 lncRNA downstream 450464 25533342 ~ 25534154 (+) True G71725
TU89720 lncRNA downstream 622580 25705458 ~ 25762742 (+) True G71763
TU89729 lncRNA downstream 662925 25745803 ~ 25748408 (+) True G71772
TU89742 lncRNA downstream 687331 25770209 ~ 25770489 (+) True G71784
AMCG00014637 mRNA upstream 144694 24928031 ~ 24937965 (+) True AMCG00014637
AMCG00014638 mRNA upstream 185650 24888533 ~ 24897009 (+) True AMCG00014638
AMCG00014636 mRNA upstream 323362 24692286 ~ 24759297 (+) True AMCG00014636
AMCG00014635 mRNA upstream 696844 24382767 ~ 24385815 (+) True AMCG00014635
AMCG00014632 mRNA upstream 2818659 22247781 ~ 22264000 (+) True AMCG00014632
AMCG00014643 mRNA downstream 4136 25087014 ~ 25102638 (+) True AMCG00014643
AMCG00014646 mRNA downstream 41216 25124094 ~ 25126045 (+) True AMCG00014646
AMCG00014644 mRNA downstream 66925 25149803 ~ 25163635 (+) True AMCG00014644
AMCG00014648 mRNA downstream 162535 25245413 ~ 25245961 (+) True AMCG00014648
AMCG00014649 mRNA downstream 290508 25373386 ~ 25374072 (+) True AMCG00014649
TU89430 other upstream 2227013 22855342 ~ 22855646 (+) True G71525
TU88725 other upstream 6808299 18271854 ~ 18274360 (+) True G71004
TU88601 other upstream 7634206 17403511 ~ 17448453 (+) False AMCG00014553
TU88385 other upstream 8613546 16465681 ~ 16469113 (+) False AMCG00014525
TU88218 other upstream 8949857 16129525 ~ 16132802 (+) False AMCG00014508
TU90165 other downstream 2752625 27835503 ~ 27841871 (+) True AMCG00014704
TU90175 other downstream 2785825 27868703 ~ 27879800 (+) True AMCG00014703
TU90214 other downstream 3219495 28302373 ~ 28304073 (+) True G72175
TU90740 other downstream 4768572 29851450 ~ 29851821 (+) True G72605
TU90928 other downstream 5681473 30764351 ~ 30805741 (+) False AMCG00014777

Expression Profile