RNA id: AMCG00015664


Basic Information

Item Value
RNA id AMCG00015664
length 450
RNA type mRNA
GC content 0.59
exon number 2
gene id AMCG00015664
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 15555165 ~ 15557776 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAACACCACAACAGGCAACTATTACTATTACATTGTTGCTAATGATGCACGGCAGAAGGAACCAGACCGTGAGAGGGGAGTGCAGAATGGCCGACGACACCAACACCCACCTGGGAGACTGCTGCAGAGACCACCGCCAGGCCGCGGGAGGAAGAACTGCGAAGAAGAACCGATGACACCCACACTGGCCCGGGCAACCGCCATGGAGAATGCTGCCAGACCACGAGATGGCGCGAGAATCCAGGTGACGCAGTACGACGGGTCAGAGGACTGGGAGACCTACCAGGCACTGTTCCAAATCACAGCCTGGGCTGGCCACTGGACCACCGAGGAGATGGCTGGGCAGCTTGCCATAGCCCTGGATGGCAAAGCCCGCCAAGCTGTCTTGGACGTGCCGGAAGAGCAGCGGCAAGATTTTGGGGCTCTCGTCTCTGCCCTCCGTCAGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124223 lncRNA downstream 240712 15314153 ~ 15314453 (-) True G99476
TU124192 lncRNA downstream 302448 15249901 ~ 15252717 (-) False AMCG00015660
TU124193 lncRNA downstream 302448 15249901 ~ 15252717 (-) True AMCG00015660
TU124194 lncRNA downstream 302448 15249901 ~ 15252717 (-) False AMCG00015660
TU124171 lncRNA downstream 428494 15124635 ~ 15126671 (-) True G99430
TU124269 lncRNA upstream 7350 15565126 ~ 15565391 (-) True G99513
TU124272 lncRNA upstream 74619 15632395 ~ 15632608 (-) True G99516
TU124299 lncRNA upstream 196040 15753816 ~ 15754026 (-) True G99535
TU124360 lncRNA upstream 321642 15879418 ~ 15883521 (-) True G99565
TU124372 lncRNA upstream 344675 15902451 ~ 15959831 (-) True G99576
AMCG00015662 mRNA downstream 216103 15338036 ~ 15339062 (-) True AMCG00015662
AMCG00015660 mRNA downstream 302444 15249977 ~ 15252721 (-) False AMCG00015660
AMCG00015658 mRNA downstream 310271 15236134 ~ 15244894 (-) True AMCG00015658
AMCG00015659 mRNA downstream 354374 15170616 ~ 15200791 (-) True AMCG00015659
AMCG00015655 mRNA downstream 447140 15094120 ~ 15108025 (-) True AMCG00015655
AMCG00015666 mRNA upstream 129866 15687642 ~ 15703121 (-) False AMCG00015666
AMCG00015667 mRNA upstream 234737 15792513 ~ 15814359 (-) True AMCG00015667
AMCG00015672 mRNA upstream 500026 16057802 ~ 16060001 (-) True AMCG00015672
AMCG00015676 mRNA upstream 694643 16252419 ~ 16272647 (-) True AMCG00015676
AMCG00015677 mRNA upstream 757712 16315488 ~ 16324527 (-) True AMCG00015677
TU124200 other downstream 294681 15259461 ~ 15260484 (-) True G99454
TU124167 other downstream 365771 15102617 ~ 15189394 (-) True G99426
TU124175 other downstream 383493 15170615 ~ 15171672 (-) False AMCG00015659
TU124012 other downstream 816891 14690387 ~ 14738274 (-) False AMCG00015645
TU124288 other upstream 143302 15701078 ~ 15703290 (-) True AMCG00015666
TU124430 other upstream 459807 16017583 ~ 16102456 (-) True G99605
TU124478 other upstream 663989 16221765 ~ 16222155 (-) True G99646
TU124562 other upstream 971601 16529377 ~ 16535468 (-) True AMCG00015691
TU124837 other upstream 2279804 17837580 ~ 17837942 (-) True G99939

Expression Profile