RNA id: TU126186


Basic Information

Item Value
RNA id TU126186
length 275
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G101045
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 24744082 ~ 24744356 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtggtcatttggtagctgtgagttccacaatgaagagtttttgaAATCCCCAGATATAAGATCCCTAAATACAAGGTGTAGGTAAGAAAtgaactattgatcagttcaatctggctttgggaacagttcttctgaacctgtaccggtgtagattggacttcaataggagaaagtgacacaataaagacatatatGAGCCGCGCAGGCGGACAGTCTTAGTGCCCACGCAGGCTCTTCATTGGGGAAATCAttgactgaacacattttttgaaaat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU126181 lncRNA downstream 114299 24629564 ~ 24629783 (-) True G101040
TU126177 lncRNA downstream 124348 24619120 ~ 24619734 (-) True G101036
TU126163 lncRNA downstream 157083 24586485 ~ 24586999 (-) True G101023
TU126059 lncRNA downstream 428663 24314177 ~ 24315419 (-) True G100933
TU126058 lncRNA downstream 429945 24313431 ~ 24314137 (-) True G100932
TU126255 lncRNA upstream 655626 25399982 ~ 25402497 (-) True G101103
TU126272 lncRNA upstream 830047 25574403 ~ 25574921 (-) True G101115
TU126360 lncRNA upstream 1251487 25995843 ~ 26045342 (-) True G101181
TU126436 lncRNA upstream 1506767 26251123 ~ 26253246 (-) True G101242
TU126443 lncRNA upstream 1519720 26264076 ~ 26264315 (-) True G101249
AMCG00015844 mRNA downstream 125912 24605666 ~ 24618170 (-) True AMCG00015844
AMCG00015843 mRNA downstream 143818 24594299 ~ 24600264 (-) True AMCG00015843
AMCG00015841 mRNA downstream 190127 24543597 ~ 24553955 (-) True AMCG00015841
AMCG00015840 mRNA downstream 283804 24454436 ~ 24460278 (-) True AMCG00015840
AMCG00015839 mRNA downstream 363613 24354563 ~ 24380469 (-) True AMCG00015839
AMCG00015862 mRNA upstream 661035 25405391 ~ 25774014 (-) True AMCG00015862
AMCG00015856 mRNA upstream 1050183 25794539 ~ 25812098 (-) True AMCG00015856
AMCG00015858 mRNA upstream 1072879 25817235 ~ 25826561 (-) True AMCG00015858
AMCG00015860 mRNA upstream 1102680 25847036 ~ 25980178 (-) True AMCG00015860
AMCG00015855 mRNA upstream 1297788 26042144 ~ 26045985 (-) True AMCG00015855
TU125431 other downstream 4464438 20269829 ~ 20279644 (-) False AMCG00015761
TU125314 other downstream 4768013 19974956 ~ 19976069 (-) False AMCG00015752
TU124970 other downstream 6113417 18628343 ~ 18630665 (-) False AMCG00015723
TU124837 other downstream 6906140 17837580 ~ 17837942 (-) True G99939
TU124562 other downstream 8208614 16529377 ~ 16535468 (-) True AMCG00015691
TU126211 other upstream 248597 24992953 ~ 25000890 (-) True G101067
TU126708 other upstream 3417481 28161837 ~ 28257732 (-) True G101456
TU126809 other upstream 4359873 29104229 ~ 29106160 (-) True G101540
TU127089 other upstream 5421670 30166026 ~ 30168248 (-) True AMCG00015936
TU127207 other upstream 5896838 30641194 ~ 30724429 (-) True G101853

Expression Profile