RNA id: AMCG00017930


Basic Information

Item Value
RNA id AMCG00017930
length 234
RNA type mRNA
GC content 0.65
exon number 1
gene id AMCG00017930
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 29273051 ~ 29273284 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAGGCGCAGAGCAACGCAGCCCTGGTGATGTCTGGAGACATGTCGCAAGACCCTTCACGACGCCGCCGGGTTGGCACTTTGGACTGTGCAGCCCACGGGACAGCAGAGGACACGTCAGCCTGCGGGACACAGACACCCCGGAACAGGAAGGACGGGCCGTCAACACACCGCGGACAGACTTCCTTCTCCGGCGGACGGACACCCCGCACACGGACTCAGTCGGCCGTCTAG

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU117522 lncRNA downstream 65247 29207470 ~ 29207804 (-) True G94218
TU117425 lncRNA downstream 537307 28733824 ~ 28735744 (-) True G94137
TU117354 lncRNA downstream 847808 28425032 ~ 28425243 (-) True G94074
TU117353 lncRNA downstream 852789 28419916 ~ 28420262 (-) True G94073
TU117336 lncRNA downstream 1175893 28093468 ~ 28097158 (-) True G94060
TU117556 lncRNA upstream 12923 29286207 ~ 29286747 (-) True G94246
TU117670 lncRNA upstream 638698 29911982 ~ 29914837 (-) True G94337
TU117708 lncRNA upstream 722965 29996249 ~ 29997513 (-) True G94358
TU117710 lncRNA upstream 725070 29998354 ~ 30002282 (-) False G94359
TU117711 lncRNA upstream 725070 29998354 ~ 30002282 (-) True G94359
AMCG00017929 mRNA downstream 119 29269281 ~ 29272932 (-) True AMCG00017929
AMCG00017928 mRNA downstream 9518 29258505 ~ 29263533 (-) True AMCG00017928
AMCG00017926 mRNA downstream 155409 29100508 ~ 29117642 (-) True AMCG00017926
AMCG00017925 mRNA downstream 181111 29079009 ~ 29091940 (-) True AMCG00017925
AMCG00017924 mRNA downstream 223654 29031879 ~ 29049397 (-) True AMCG00017924
AMCG00017933 mRNA upstream 1610 29274894 ~ 29283831 (-) True AMCG00017933
AMCG00017935 mRNA upstream 15545 29288829 ~ 29304804 (-) True AMCG00017935
AMCG00017932 mRNA upstream 33799 29307083 ~ 29332479 (-) True AMCG00017932
AMCG00017934 mRNA upstream 81755 29355039 ~ 29365548 (-) True AMCG00017934
AMCG00017938 mRNA upstream 252151 29525435 ~ 29527497 (-) True AMCG00017938
TU117465 other downstream 397128 28874161 ~ 28875923 (-) True G94172
TU117337 other downstream 1128462 28103299 ~ 28144589 (-) True AMCG00017906
TU117034 other downstream 3162977 26109060 ~ 26110074 (-) True G93796
TU117033 other downstream 3165246 26104026 ~ 26107805 (-) True G93795
TU116982 other downstream 3257559 26012661 ~ 26015492 (-) False AMCG00017866
TU117930 other upstream 1354704 30627988 ~ 30658493 (-) True G94543
TU118224 other upstream 2989492 32262776 ~ 32263531 (-) False AMCG00018000
TU118225 other upstream 2998410 32271694 ~ 32276372 (-) True AMCG00018004
TU118217 other upstream 3020736 32294020 ~ 32295433 (-) False AMCG00018007
TU118287 other upstream 3181801 32455085 ~ 32456410 (-) True G94835

Expression Profile