RNA id: TU118438


Basic Information

Item Value
RNA id TU118438
length 201
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G94936
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32848266 ~ 32848466 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtctgtgtgtgtgtttgtgagagcgagagagagagtgtctgtgtgagtgtgtgtgtgtctgtactgtctgtgtgagtgagagggtgtctgtgagtgtgtttgtgagtgtgtgtgtgtgtctgtactgtgtgtgtgagtgagagggtgtctgtgtgtgtgtttgtgtgtctgtgtgagtgtgtgtgtgtctgtactgtctgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118424 lncRNA downstream 57578 32789779 ~ 32790688 (-) True G94927
TU118408 lncRNA downstream 186625 32656030 ~ 32661641 (-) True AMCG00018020
TU118233 lncRNA downstream 501683 32345250 ~ 32346583 (-) True G94791
TU118171 lncRNA downstream 651660 32192183 ~ 32196606 (-) True G94747
TU118071 lncRNA downstream 1019466 31828459 ~ 31828800 (-) True G94665
AMCG00018028 mRNA downstream 367 32836631 ~ 32847899 (-) True AMCG00018028
AMCG00018029 mRNA downstream 28819 32795884 ~ 32819447 (-) True AMCG00018029
AMCG00018022 mRNA downstream 72186 32767245 ~ 32776080 (-) True AMCG00018022
AMCG00018024 mRNA downstream 134643 32694960 ~ 32713623 (-) True AMCG00018024
AMCG00018025 mRNA downstream 157395 32688381 ~ 32690871 (-) True AMCG00018025
AMCG00018032 mRNA upstream 3338 32851804 ~ 32864532 (-) True AMCG00018032
AMCG00018031 mRNA upstream 18855 32867321 ~ 32889902 (-) True AMCG00018031
TU118371 other downstream 195582 32648464 ~ 32652684 (-) False G94887
TU118375 other downstream 195582 32648464 ~ 32652684 (-) True G94887
TU118334 other downstream 242515 32602918 ~ 32605751 (-) False AMCG00018021
TU118287 other downstream 391856 32455085 ~ 32456410 (-) True G94835
TU118217 other downstream 552833 32294020 ~ 32295433 (-) False AMCG00018007

Expression Profile