RNA id: TU93798



Basic Information


Item Value
RNA id TU93798
length 239
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G63350
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 12022515 ~ 12022753 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATAACATCGTGAGGTCTGAAAAGATCCTGTGTGAAAACACTACGCTACTGTTCGGCCGTAGAGTCGATGTTGGACGAGGCAACGAGCATTCGCCACGAAGTCCGcctcttctcagggtgaagcaTGAaactaattatgttttaaatgtcgCAGGCAGAGATTGCTAGCAATAAAACAACCACAGCTACATAGTCTGCCCTGCCCTGGTCCTCCAGCCAAAGCCTACACAGACACTGAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU93795 lncRNA downstream 2562 12019711 ~ 12019953 (-) True G63347
TU93792 lncRNA downstream 5164 12016726 ~ 12017351 (-) True G63344
TU93738 lncRNA downstream 166453 11855745 ~ 11856062 (-) True G63304
TU93660 lncRNA downstream 199271 11821284 ~ 11823244 (-) True G63254
TU93661 lncRNA downstream 199271 11821284 ~ 11823244 (-) False G63254
TU93778 lncRNA upstream 28604 12051357 ~ 12052979 (-) True prok1
TU93808 lncRNA upstream 30378 12053131 ~ 12054530 (-) False prok1
TU93769 lncRNA upstream 81825 12104578 ~ 12139398 (-) True G63321
TU93764 lncRNA upstream 108738 12131491 ~ 12134728 (-) True G63316
TU93777 lncRNA upstream 136436 12159189 ~ 12198367 (-) True G63329
XM_043246544.1 mRNA downstream 9365 12010488 ~ 12013150 (-) True zgc:110353
XM_043246540.1 mRNA downstream 39206 11977200 ~ 11983309 (-) True adora1b
XM_043246465.1 mRNA downstream 47686 11970741 ~ 11974829 (-) True dclre1b
XM_043246571.1 mRNA downstream 131232 11883738 ~ 11891283 (-) False lhfpl5b
XM_043246585.1 mRNA upstream 28665 12051418 ~ 12053993 (-) False prok1
XM_043246423.1 mRNA upstream 55486 12078239 ~ 12083038 (-) True rbm15
XM_043246535.1 mRNA upstream 63166 12085919 ~ 12091662 (-) True alx3
XM_043246457.1 mRNA upstream 127234 12149987 ~ 12168140 (-) True kcnc4
XM_043246451.1 mRNA upstream 146134 12168887 ~ 12171370 (-) True hspa1b
unassigned_transcript_1295 other downstream 225313 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 243264 11778271 ~ 11779251 (-) True G63274
TU93421 other downstream 458110 11562278 ~ 11564405 (-) False G63095
TU93842 other upstream 240941 12263694 ~ 12264533 (-) True G63385
XR_006251575.1 other upstream 328493 12351246 ~ 12363095 (-) False kcnq2a
TU94636 other upstream 1786675 13809428 ~ 13863250 (-) True G63933
XR_006251614.1 other upstream 2701455 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 2756778 14779531 ~ 14781710 (-) True G64228

Expression Profile