RNA id: TU95397


Basic Information

Item Value
RNA id TU95397
length 3193
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G64502
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 16373321 ~ 16376597 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGTCGATGTATTTTTATGTCACTAACTTTAACCACGCATCGCAAATACCAGTTCTCACTTGGGTCACGTTTGCAGTTCCCATTAAGATTAATTTTTAACCACTGTAGAAAAGTTGTGCAAGTTTATGACTGAGATTCCAAGTCTcgtttatttaaaacttgacattTCCGATTGGTCAGATGAGTCCATACATAGCCCACTGTTTTGGATATTCTGATTAATTATCAAAGTAAAGTAGAAAAGGCAGCACGttggaaaaaaaggtacaatatTATGAACACTGACATACGTATgcataaaatagtaaaaaatacaaaagtaccTAAAACATTCGAATGGTAAAAGACTATTAGGCCTATTTTAGACAGaattaaatgcatgaaacaGTTTTTTCATCATTCACATATAGTTTCCTAGCTATAGTCAAACACTATTTATTGTAGCGACATGCATCACATAATAACTGGACACGTGTTTATAGAGAAGACAAACAGTGTGGGAAATGAGAATACTCAAAAGAGTATTATAGGCTTGCTACAGTGAATTGGGAAAAGGCATGAAGATGAATTTGGACACTTGTTTTAATGTAGGATGATATTAAGAGTTTGTATTTGAAATTCACTCGTGAGTACCAATAGCAGCTATGAACGGACACGGGCCAGATTCTGGGTTGTAAATGTTAgcttacattataaaatgtacgAGTCAATCACGGAAGACATGCAGACAGACTTTTGGAAGAGGTCTACAGTGACCTTGTGTAATTGAGCCTGAGGGTGGCACTGTAATGTTGACGGACAGGCTATGTGCACCtgtgcataaaatgtgtttgaagGTTAACTTAAAATTATGGGAATTGGCGAGAGGATAACGAAGCCATGTCAAGTCAATACAAAACATAACGGAACGGTTTACAGCCTATTAACGCAAGCACATTTAAACGAAAGGATTTACACTTTCACTAAAGCCTCCCACCCACTGTTAAAGAAGAGCTGGTTTACTAGTTGCTAAACTGATGCAGACTAAACTCAAAAGTCAAATGTGAGATTTTAATATATCTATCTCACTGGAAGGTTTGAACGATATTAATTGCAAAATGCTACTGAAATACATTTCCGAGTTAAATGTAGGGTTGATTATGCTTACATAAAAGGTTCGTTTTCAAGTGGAGTAATGTTTCGGCCAGGAATTGCCTCTAGAGAGGAGTAAAGCTGGAAAAAAATGATACAGTATCTTCTTCATCCCCACTCATAACCCCACAACAGTATCAGAAATGTCTAGCCATGTCCAAAACATGACTTAAAACTGATCAAGAGCAGTAACCTTATCACAACTGAGACGCCATCACATGACCACCACCTTTTACAGTATCAGATTTTTCTCCAGTATGTATTTCTTGCTTTCGTTTCAATATGGCTGCTTTGGAAATAGGTTTACGGCTATGAAATCTCTTGTGCGATCTTAAATTGCACAgccatttaaatctttttttacacAGAGAACACAAATAAGGTCTCTTGTCTGCGTGACTTTTCAGGTGTATCTCTAAGTGCGATGGCGAAGCGAATTTTTTATTACAACGATAACAATCAAACGGCCTTAGCCCCGAGTGAATGCGCAGATGATTTTTGAAATTGCTCGTTTTCGCGAACTTCTTGCCACATTCAGAACACTGGGATTTCTCTCCAAAATGAGTCTGCAAGTGACTTTTCAGCTGTCTTAGATAGGCGAAACTCTTCTCACACTGAACGCACATGTAAGGCCGGTCTCCGGTGTGAAGCCTCATGTGAGCCGTAAGGTTTCCTTTAAGTGCGAAGCTTTTGCCACAAGGACAGGAGAACGGCttttctccggtgtgaatccGCATGTGAATCTGGAGTTTAGATTTGCTCTCGCAAATCCTCCCACAGTGATGGCACGTAAAAGGCTTCTCATTGGTGTGAACGCTTCTCATGTGACCATTAAGAAGTCCTTTATATCTGAAACTCATTCCACAGTGATGGCAGCTGAAGggcttctctcccgtgtgaAGCCTCATGTGATAATTCAGGAGTCCTTTATGtatgaaactcttcccacactgcGGGCAAGAGAACGGTTTTTCCCCCGTGTGCACTTGTATGTGAATCTTAAGGTTTGATTTGCTCTCGCAAATCCTTCCACAGTAATGGCACACGAAAGGCTTCTCCTCGGTGTGAATGTACCTCACGTGGCGGCTGAGCTGTCCTTCGAGAatgaaactctttccgcactgaaGGCAGGTGAAAGGCCTTTCTCCGGTGTGAAGCCTCATGTGGTAATTGAGGGACGTTTCGTGTTTTAGACACTTCCCACACTGGTGGCACTTGAAAGGCTTCTCCTCGATGTGACATCTCATGTGCGCCTTTAGGTTGTTTTTTATCTGGAAACCCTTTCCACATTGCTGGCACTtgaagggcttctctccggtgtgaattaTCACATGCCTGTTGAGGCGTTCTATGTCTTTgaaactttttccacactgGTGGCAGATAAAATGGCTCTCTCTTAAGTGAATTCTCTTGTGCAAATTAAGGGTTACTTTATGTatgaaactctttccgcactgatCGCACTTGAAAGGCCTTTCCCCCGTGTGGATTCTCATGTGATCCTTTAAGGTCTTGCTTCGAGTGtaactctttccgcactgatCGCATttgaaaggcttctctccggtgtgaattctcatgtggtTTTTAAGGCTTCCGTTCGTAGTGAAAACGTtcccacactgttggcaggtgaagGGGCACTGCACACTGTGCATTAACTCGTGTTTTTTAAGGCTTTTTTCATAAGTGAAATTCCTGCCACATTGAGGGCAGAtgtaacagtttttaaaacttttctttcgAGGCTTTTTTTGTGAGGGCTCCTTTTCAAGCTTTTCTATGTGGTGTTTATCGTATGGATCTTCTTCCTCCATTTCATACAGTTCTTGACTCTCCACTTTCATCACCACTAGGTCTAaggtggaaaaaagaaaaatacaagtGAACTcagtaaaatgacattaaacaactatatttattaaattactaaatgctattttttccattatcatattaattgcaaataatcaTGTCTAGATTCCTGCAGCAGTTACATTAAGGTGATTTTCAATTTTGGGGAGcaactagttacatgtaacgtaattgcataattaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006251654.1 lncRNA downstream 89929 16261537 ~ 16283392 (-) True LOC122350933
TU95376 lncRNA downstream 240509 16131611 ~ 16132812 (-) True G64481
XR_006251675.1 lncRNA downstream 278761 16079362 ~ 16094560 (-) True LOC122351008
TU95371 lncRNA downstream 309568 16062879 ~ 16063753 (-) True G64476
XR_006251684.1 lncRNA downstream 591434 15767668 ~ 15781887 (-) False LOC122351100
TU95398 lncRNA upstream 517 16377114 ~ 16377369 (-) True G64503
TU95412 lncRNA upstream 3264 16379861 ~ 16384905 (-) True G64508
XR_006251563.1 lncRNA upstream 31257 16407854 ~ 16409696 (-) True LOC122350093
TU95443 lncRNA upstream 83360 16459957 ~ 16460330 (-) True G64531
TU95512 lncRNA upstream 181471 16558068 ~ 16661411 (-) True G64556
XM_043246367.1 mRNA downstream 9377 16353908 ~ 16363944 (-) True setd1bb
XM_043247379.1 mRNA downstream 28827 16313504 ~ 16344494 (-) True LOC122350700
XM_043247395.1 mRNA downstream 180977 16191087 ~ 16192344 (-) True LOC122350711
XM_043248015.1 mRNA downstream 381063 15967511 ~ 15992258 (-) True LOC122351126
XM_043247401.1 mRNA upstream 21979 16398576 ~ 16407398 (-) True LOC122350716
XM_043247402.1 mRNA upstream 386700 16763297 ~ 16835560 (-) True LOC122350717
XM_043247728.1 mRNA upstream 669870 17046467 ~ 17096795 (-) False LOC122350945
XM_043247729.1 mRNA upstream 669870 17046467 ~ 17096791 (-) True LOC122350945
XM_043247727.1 mRNA upstream 669870 17046467 ~ 17096790 (-) False LOC122350945
XR_006251609.1 other downstream 672425 15649226 ~ 15700896 (-) False mvb12bb
XR_006251608.1 other downstream 672425 15656919 ~ 15700896 (-) False mvb12bb
TU95181 other downstream 1089191 15283861 ~ 15284130 (-) True G64353
TU95023 other downstream 1591611 14779531 ~ 14781710 (-) True G64228
XR_006251614.1 other downstream 1641930 14724208 ~ 14731391 (-) False slc20a1a
TU95424 other upstream 31237 16407834 ~ 16409664 (-) False LOC122350093
TU95703 other upstream 946463 17323060 ~ 17343739 (-) False LOC122350953
TU95705 other upstream 948447 17325044 ~ 17401228 (-) False LOC122350953
XR_006251564.1 other upstream 982788 17359385 ~ 17361850 (-) False zgc:194007
XR_006251566.1 other upstream 982788 17359385 ~ 17361850 (-) False zgc:194007