RNA id: XR_006251608.1



Basic Information


Item Value
RNA id XR_006251608.1
length 1201
RNA type transcript
GC content 0.47
exon number 10
gene id mvb12bb
representative False

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 15649226 ~ 15700896 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTGAAAAGGACGGTGCAAGGTTGAATATGTTATCTCGGTAGTGATATTCGCGTAGGCAGTCTGTGCTGTTTGGTTCCCTCAGCAAGCATGGCAGATCTTCAGAACATCTCTGGTGGTAAAGCAGAGCTGCAGCCTGAAGCCATGACTGATATCGGTGTGCTGGCATCCAAGAAAGAACCTCCAGCAGGCTACTATATTGTTGCACAAACAACAGATGGCTTTGACGCCAACCTGTGGAAGGACAGCATATTCAAATCCAAGGTCACACGCTATCTTTGCTTTACCCGAGCTGCCACCTCCAAAAACAAGCAATTATGCAACGTTGTCGTGGACGTGAAGCTGATCGACTTGAAGGACTGTTTGCCAGAGGGCTTCACTCCGATCCAAGAAACCACGGATACCCaggAGCAGGCTTTGAGGAAGGAGAGACTGTGTGTGAAGTTGGTCCCCAGGCACAGCACTGGTACGGCTATATGCGATGTGGTTATACAGGGGAAATCAAAGCACAGCCTCactaattatacatttataggTGAACTGAATGGTTTGGGAATTTGGTATCAGCTGGGAAAAGTCACTAAGTCACAGGATGCAGAGCACAAAATCCCCTCCACCTCTGGTGTTGCCAGACAATTCCCACAGTCTCCGGCCTCCAGTCTTACTAAAAAGAACATGGTTAGGCCAGACTACGAACACCAAATCTACAACCTCTACACCAAATCAGaaatgcagccccaaaCGTTCAAGGAACCTCCAgcatgcttcactgttgcctgcagaGACTCATTATTGTACCACTCTCCAGCCCTTCAACGAACAAACTGCCTTCTGCTACAGTCAAATATTTCAATAGGCTCATCAGTCCAGAGaacctgctgccatttttctgcaccCTAGTTCCTATGTTTTCATGCACACTTGAGTTGCTTGGCCTCTTTCCCATGTCGGAGGTATGACTTTTTGACtgcaactcttccatgaagacCACTTCTGCCCGGACAGTAGATGTGTATACCTGGGTTCCACTGGTTTCTGCCAGTTCTGAGCTGATGGCACTACTGGACATCTTCCGATTTCAAAGGCTATGGATGATATACCCTTTATGATCTCCAAAAAATCTACCTCCACATCCAGAGATGAAATAGATCCAGTCCGTTTCTTGAACATTGCTATCAAATCACCACAACAGATTGAAGAGGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95247 lncRNA downstream 5060 15651636 ~ 15651859 (-) True G64409
TU95187 lncRNA downstream 360698 15295350 ~ 15296221 (-) True G64359
TU95185 lncRNA downstream 363934 15292345 ~ 15292985 (-) True G64357
TU95184 lncRNA downstream 366428 15290269 ~ 15290491 (-) True G64356
TU95183 lncRNA downstream 367727 15288911 ~ 15289192 (-) True G64355
XR_006251684.1 lncRNA upstream 66772 15767668 ~ 15781887 (-) False LOC122351100
XR_006251683.1 lncRNA upstream 66772 15767668 ~ 15781887 (-) True LOC122351100
TU95371 lncRNA upstream 361983 16062879 ~ 16063753 (-) True G64476
XR_006251675.1 lncRNA upstream 378466 16079362 ~ 16094560 (-) True LOC122351008
TU95376 lncRNA upstream 430715 16131611 ~ 16132812 (-) True G64481
XM_043247210.1 mRNA downstream 8597 15578108 ~ 15648322 (-) False LOC122350591
XM_043247212.1 mRNA downstream 8597 15578108 ~ 15648322 (-) False LOC122350591
XM_043247213.1 mRNA downstream 8597 15578108 ~ 15648322 (-) True LOC122350591
XM_043247214.1 mRNA downstream 18626 15578108 ~ 15638293 (-) False LOC122350591
XM_043247215.1 mRNA downstream 19612 15578108 ~ 15637307 (-) False LOC122350591
XM_043247774.1 mRNA upstream 133069 15833965 ~ 15948783 (-) False pbx3b
XM_043247772.1 mRNA upstream 133069 15833965 ~ 15948783 (-) False pbx3b
XM_043247769.1 mRNA upstream 133069 15833965 ~ 15948783 (-) False pbx3b
XM_043247771.1 mRNA upstream 133069 15833965 ~ 15948783 (-) False pbx3b
XM_043247767.1 mRNA upstream 133069 15833965 ~ 15948783 (-) False pbx3b
TU95181 other downstream 372789 15283861 ~ 15284130 (-) True G64353
TU95023 other downstream 875209 14779531 ~ 14781710 (-) True G64228
XR_006251614.1 other downstream 925528 14724208 ~ 14731391 (-) False slc20a1a
TU94636 other downstream 1793669 13809428 ~ 13863250 (-) True G63933
XR_006251575.1 other downstream 3293824 12351246 ~ 12363095 (-) False kcnq2a
TU95424 other upstream 706938 16407834 ~ 16409664 (-) False LOC122350093
TU95703 other upstream 1622164 17323060 ~ 17343739 (-) False LOC122350953
TU95705 other upstream 1624148 17325044 ~ 17401228 (-) False LOC122350953
XR_006251564.1 other upstream 1658489 17359385 ~ 17361850 (-) False zgc:194007
XR_006251566.1 other upstream 1658489 17359385 ~ 17361850 (-) False zgc:194007

Expression Profile