RNA id: XM_043247903.1


Basic Information

Item Value
RNA id XM_043247903.1
length 2840
RNA type mRNA
GC content 0.42
exon number 15
gene id mutyh
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9116620 ~ 9121780 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aagcagctttacagtagaACATGTACACACGTTACAGTCTATACATTATAGGCTACATAATGTTAAGGCTAAAGAAATATTTGTCAATCTGGCCTTCCATAATTTCCACATACCATCGTGTAGCTCGAGCCTTACGCCTCAGGAGTCTGCACTTGCCAACGACATCAGTATCTATTAGAAATATGTGTCCCCCATTCAACCAGGTGAGACTGTTGTCTAGTCGTGACTGAAGCTGCGCGACTGCGACGCAATCATGTGTGCCCCGATTAAGATGCAGTATTAGCTATTTTAAGAATTTCTCGCAAAACATGTTTCCGCAAGCCTTTGCTTTCGGTTTTGCCTACTTATTATGACTGAGACTTCAGTGTTGTGTTGAGACTTCCAcgcaagatttatttttgtatactaATTAATGCTAGTTTGCTGTAATCAGACTTATCCCCACAATATCCCCCAAAGTACCGTAATGTGCATACATATCCAACTCTAcgttatattagtatttttcaaTATTGTTTAGTGCGGATATGCACACTGGGACACAGTGTTTTATACATGCTGCTTTCCAGAATAAtactgtttccaaaaaaaaactgttttaatgccACTAAATCattagtaatattaatgttttatgttactGAATACTTTCAGTGTTACTAAATCCAGACGTTACTTCCGGGTTTGTTGTGCTAGTACGCAATGTTATCGTAAGGGGGCAGCCGCAGCATGTTGTGGGAACACGTTTGTTCTTTGCTGTGTTACTAACAGTAGTAACGTTACtttttgcatgttgtttttaaatatacgaTGTTAACGTTCTGCCTGATGCTTAATTCGTCGTATTTTTTCTAATAGCGGCGGTGTGCagatagtttttattttaaccgcTAGCTGTTTCCTACACGTTGTTTATAAACTCGTGATAGATTGGTTTAGCGCTATGAGCAGGTTAAGATCTGCAGTTCAGAAGGGGACGAGAGCGGCTATAGAAAACAGAGAGGCGATCAAATCCAGCGATAAGACGAAATCAAAGCCTGCCATTAAAGAAGAGGAACCATCTGAAACCGAACCTTCCTCACCATACCACTTTTTCCATGATCCACCTGAAATTCCTCTTTTCCGATCTCACCTGCTGCACTGGTATGATCAGAATAAGAGAGAGCTTCCCTGGAGGACACTGGCTATGACAGAACCAGATGTTAATATCAGGACATATGGAGTGTGGGTCTCAGAGATCATGTTACAACAGACTCAAGTTGCCACAGTGATAGACTACTACAACAGATGGATGAAGagaTGGCCAACTGTGGAAAAACTTGCTGCAGCTACACTCGAGGAAGTGAACCAAATGTGGGCAGGTCTCGGATATTACTCTCGAGGACGCAGGCTGCATGAAGGTGCTCAGAAAGTTGTATCAGAACTTGATGGACAGATGCCAAAGACCACAGCTGGACTACTAAAACAGCTGCCTGGAGTTGGACGTTACACCGCTGGGGCAATCAGTTCCATAGCTCTTGGAAAGGTGACGGGTGCAGTTGATGGAAACGTCATTCGAGTTCTTTGCCGCGTTCGAGCTATAGGAGCAGACAGCACTAGTCCTGCTGTAACAGATGCTTTGTGGAAAATTGCTGATGCACTCGTTGATCCAGAGAGGCCCGGAGACTTTAATCAGGCTATGATGGAATTAGGGGCAAGAGTCTGTACCCCGAAATCCCCCCTGTGCGCCCAGTGTCCCGTTCAAACCCACTGCCATGCGTTTAGGAAGGTAAGTATTAAACAAGAGACTGACTCCAAAAGACTTCTAAGTCAACTTAGAGTCTCAAAGCTCAACACTTCTGTTCCTGACATAGAGAATTGTTTGGCCGCTGGCAGTTGTTACTTGTGTCTGTCAGAGGACTGGGACCCTCGGCTGGGGGTGCAGAATTACCCAAGAAAGCCTGTTAAAAAAGCTCCACGTGTAGAGCAGACCCTAACCTGCGTAGTGGAACGTCAGCGAGCCGGAGAAGACATGGAGTATCTGCTCACTCAAAGACCAAGCAAAGattttggATTACTTGGATGTATTGCAGGACTCTTGGCAGGGATGTGGGAGCTACCCAGCATGCTTTTGGAGTCTGACATCtcaaagaataaatataaaggcTTGATATGTGACATGATACAAAAACTGCTGGAAAAATCTCTAGATGCCAACTCAGTGCAGTTTGTTGGAGAGGTTGTGCATATTTTCTCCCACATTCATCAAACCTATATAGTCTTTTCCGTGCGTGTGTCTGACTGGTCAGAAGGTGAGCAAGAGCAGAAAACCTGCTGGCTCACTAAATCTGCTCTGAAGGAGGCAGCTGTGTCCACTGGGGTTAAAAAGATCATGATGCTCTATGAATCTCCATGCAAGGTGGACAGCAAGgaaaagaagagaaaatccAGCCCTGAGAAAcgatcaaacaaaataaaaaagactaaGGGTGGTGTTACTAATGAAGGAACAAAGCAACTCTGCCTCAGTAAATTCTTTTCTACCTCTAAGACAAAGGGCAAAAGAGATAACTGTTGACAAAATTTTTTGATATGGTCAGTGTGTAGTCATCGTGTAAATTTGGTATGTCAAGAGTGTGACATATAGTAACACATTACCTAcagctttaatgttttattttttaaagggatagttgtgtttttaaataaataataaatgtataataatgatttttaaaaatgggtttcagaataaaatactttttttcgaATAATTCTGACCTGATTTCAGTAACACAAttgcacacacattttttagTTTCAGCATACTTTTACAGTAACAGCATTTAGTCAGACATTGG

Function

GO: NA

KEGG:

id description
K03575 mutY; A/G-specific adenine glycosylase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92265 lncRNA downstream 31426 9082795 ~ 9085194 (-) True G62293
TU92203 lncRNA downstream 77920 9030865 ~ 9038700 (-) True G62250
TU92206 lncRNA downstream 78156 9030865 ~ 9038464 (-) False G62250
TU92223 lncRNA downstream 109515 9006834 ~ 9007105 (-) True G62263
TU92222 lncRNA downstream 109841 9006555 ~ 9006779 (-) True G62262
TU92550 lncRNA upstream 286634 9408414 ~ 9414439 (-) True G62519
TU92551 lncRNA upstream 286634 9408414 ~ 9414439 (-) False G62519
TU92557 lncRNA upstream 404847 9526627 ~ 9526966 (-) True G62525
TU92615 lncRNA upstream 581179 9702959 ~ 9703191 (-) True G62564
TU92616 lncRNA upstream 581596 9703376 ~ 9703598 (-) True G62565
XM_043247906.1 mRNA downstream 242 9113487 ~ 9116378 (-) False elovl8b
XM_043247905.1 mRNA downstream 242 9113489 ~ 9116378 (-) True elovl8b
XM_043247367.1 mRNA downstream 3270 9110391 ~ 9113350 (-) True rps8b
XM_043247013.1 mRNA downstream 98620 9009726 ~ 9018000 (-) False acot11b
XM_043247595.1 mRNA upstream 669 9122449 ~ 9127648 (-) False armh1
XM_043247597.1 mRNA upstream 669 9122449 ~ 9127640 (-) False armh1
XM_043247596.1 mRNA upstream 669 9122449 ~ 9127625 (-) False armh1
XM_043247593.1 mRNA upstream 669 9122449 ~ 9127625 (-) True armh1
XM_043247677.1 mRNA upstream 6093 9127873 ~ 9131091 (-) True guk1b
XR_006251592.1 other downstream 459334 8652426 ~ 8657286 (-) False pola2
TU92042 other downstream 466655 8647281 ~ 8649965 (-) False mrps36
TU92043 other downstream 466655 8647281 ~ 8649965 (-) True mrps36
XR_006251693.1 other downstream 686846 8429694 ~ 8429774 (-) True LOC122351130
XR_006251694.1 other downstream 687076 8429474 ~ 8429544 (-) True LOC122351131
XR_006251623.1 other upstream 136172 9257952 ~ 9262826 (-) False mindy4
TU92748 other upstream 832970 9954750 ~ 9961701 (-) False mllt1a
TU92747 other upstream 840017 9961797 ~ 9969485 (-) False mllt1a
TU92903 other upstream 1267403 10389183 ~ 10392043 (-) True G62760
TU92984 other upstream 1318984 10440764 ~ 10478685 (-) False G62826

Expression Profile