RNA id: CI01000300_00313257_00313598.mRNA



Basic Information


Item Value
RNA id CI01000300_00313257_00313598.mRNA
length 385
RNA type mRNA
GC content 0.50
exon number 1
gene id CI01000300_00313257_00313598
representative True

Chromosome Information


Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 313257 ~ 313641 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CGCTGCTATATTCCTTGTCTTCTGATTGGTTGTGGATTAAAACGCAGGCGGGATATTGTATCCGGGGGGGCGGGTCTCCACGGTCTCGATGAGTGGTGGACTCTGGTAAGCGTTGACGGGGATGGTAGTCTGACCGATTACATCATTGGAGGGGTACGGCTGCTTGGGTGCCTGACCGTCCACGGGCTCGGTGGAGAACAGTGTCATGTCTGTACCGAGCAGGAACCTCTGAACAGCACACACCGTAAGGCCCGCCTAGTCAGGATAAGCAGGATTATGCATATTAGTCTGATTAACATGTTAGTGAGAAAGATAACCAAGCTTTTGAGGTATCAAGCATAGTAGCAAGAGTTAGTTGGAATGCTTGAGTTAATCAAGTTTCAGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU469008 lncRNA upstream 18283 294550 ~ 294974 (+) True G408166
TU469005 lncRNA upstream 24294 288654 ~ 288963 (+) True G408163
TU469004 lncRNA upstream 33940 278800 ~ 279317 (+) True G408162
TU468983 lncRNA upstream 83468 229399 ~ 229789 (+) True G408149
TU468918 lncRNA upstream 166022 146998 ~ 147235 (+) True G408104
TU469013 lncRNA downstream 6968 320609 ~ 320843 (+) True G408171
TU469014 lncRNA downstream 7236 320877 ~ 321076 (+) True G408172
TU469050 lncRNA downstream 59259 372900 ~ 373116 (+) True G408197
TU468964 lncRNA downstream 127811 441452 ~ 475962 (+) False G408141
TU469078 lncRNA downstream 136897 450538 ~ 461022 (+) True G408216
CI01000300_00226653_00303160.mRNA mRNA upstream 10097 226653 ~ 303160 (+) True CI01000300_00226653_00303160
CI01000300_00180177_00181561.mRNA mRNA upstream 131640 180120 ~ 181617 (+) True CI01000300_00180177_00181561
CI01000300_00150486_00160308.mRNA mRNA upstream 152742 150486 ~ 160515 (+) True CI01000300_00150486_00160308
CI01000300_00103395_00123529.mRNA mRNA upstream 189728 103395 ~ 123529 (+) True CI01000300_00103395_00123529
CI01000300_00003224_00007587.mRNA mRNA upstream 305223 3224 ~ 8034 (+) True CI01000300_00003224_00007587
CI01000300_00324861_00371897.mRNA mRNA downstream 10925 324566 ~ 372421 (+) True CI01000300_00324861_00371897
CI01000300_00373895_00378177.mRNA mRNA downstream 60254 373895 ~ 378403 (+) True CI01000300_00373895_00378177
CI01000300_00380880_00388140.mRNA mRNA downstream 67239 380880 ~ 388565 (+) True CI01000300_00380880_00388140
CI01000300_00390712_00395191.mRNA mRNA downstream 76970 390611 ~ 395743 (+) True CI01000300_00390712_00395191
CI01000300_00422911_00432735.mRNA mRNA downstream 108950 422591 ~ 432772 (+) True CI01000300_00422911_00432735
TU469422 other downstream 662959 976600 ~ 977099 (+) True G408510
TU469410 other downstream 703426 1017067 ~ 1020734 (+) True G408498
TU469837 other downstream 1319389 1633030 ~ 1634969 (+) True G408910
TU469855 other downstream 1436259 1749900 ~ 1759036 (+) False G408928
TU469856 other downstream 1436259 1749900 ~ 1759036 (+) True G408928

Expression Profile