RNA id: TCONS_00001574


Basic Information

Item Value
RNA id TCONS_00001574
length 1418
RNA type mRNA
GC content 0.37
exon number 8
gene id XLOC_000992
representative True

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 8017069 ~ 8020589 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tttacaataaatgCTCACAtcttgtaacaccctgttacgaACACTCTTTGAAGAAATTGCAGCTAAGATTTGCTGCCATATACCATCGTACCCATCTGCGCATTAGACTATAGGCTGCTGAAGAAGGTATATTTTGGACAAACTGTGTGTGCTTATACATTTATAAGAGGAAAAAAGAAATGGGAGgatcaaaatcaaaacaaacacccactgatgATTCTTCCAAAAAGCTGGACAAACCATGGAGGAACTTTGACTGGGAACAGAAGGACAGACTTAAAGAACGCCTAGAAAAGTTTCAGCTGAGCAGTCCAGATCTTAATTGCGTCAAGCTCCTGGTAGCTGGACAAATTGGAGCAGGAAAGTCCAGCTTTATTAACTCAGTCAACAGTGCCTTTCAAGGACAGATTGTCTGTGATGCACAAGCTGATGCTCAATCAGCAGCCAGTCACAGTTATACAAAAAAACTGGAAGGATACCGCATCAAAAATGCAGATGCAGATTTGCCTTTTGAAATCTGTGATGTAATGGGTTTAGAACCACAAGAATTATCTGGGTTACAACCAGAAGATGTTGTCAAGATCATACACGGCCATGTGAAGGAGGGCTATAAGTTTACAGAGAATCCAATAACTAGTAAAAGTGAATCATACAATGAAATCCCTTCACTGTCAGATCAAGCATTCTGCCTGGTGTACGTTGTGGATGCAAATACAATCCAGTTAAAGTCAGATGATACAACACTTCTTAAAAAGCTGAGGCTCATCCGCAAGAAACTCACTGATGAAGGCATTCCTCAGGTGATTGTCCTGACTAAAGTGGATGAAGCATGTAAACTGGTCGAAAGTAATCTAAAGGACATCTACTACagcattacaattaaaaaaaagATGGAGTTCTGCAGTGCAGAGATTGGCGTGCCAATGACCATGATTTTCCCTGTCAAGAACTACCATAATGAGGTTGACACAGATGACTCTGTTGATGCTTTGATACTTAAGGCATTTGATCAAATTGTGCGTTCAGCTAATGCCAGACTAAGCCGTGGATCTTCCAATGAATAAGAAATGAATGTTGACGACCTGAGAATGTTGTAGAGCAGAAGAACACAGTTATGTTTTACTGGGTAAAATATAGGCTTATAGATTTTTAGAATAACACCTACAATTGTATTTAGGATGAATATGAAATAACCCATATGTAATAATCTTTATCAAGACACGTTCTATGTATACATCATGATAGAAAAACATTTGACAATGGTAAAGGGTATCACACATAGGCCTATCAGAAGTTTTGAAGCATCCTTATGGATGGTTTAAAAAttgatgtttaaaataataataataaaaaataaataaataaataaataaataacaaaaaagtaaatttgcATCTTTATGAAGATCCAATTTAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000143881

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00002909 lncRNA downstream 96367 7915480 ~ 7920702 (-) False XLOC_000984
TCONS_00003330 lncRNA downstream 96369 7915480 ~ 7920700 (-) False XLOC_000984
TCONS_00003331 lncRNA upstream 181801 8202390 ~ 8205228 (-) True XLOC_000996
TCONS_00003332 lncRNA upstream 484388 8504977 ~ 8507689 (-) False XLOC_000998
TCONS_00001581 lncRNA upstream 485833 8506422 ~ 8510066 (-) True XLOC_000998
TCONS_00001583 lncRNA upstream 522563 8543152 ~ 8543611 (-) False XLOC_000999
TCONS_00001584 lncRNA upstream 523098 8543687 ~ 8545359 (-) False XLOC_000999
TCONS_00001573 mRNA downstream 4593 8001435 ~ 8012476 (-) True XLOC_000991
TCONS_00001572 mRNA downstream 16641 7994112 ~ 8000428 (-) True XLOC_000990
TCONS_00001571 mRNA downstream 18576 7993632 ~ 7998493 (-) False XLOC_000990
TCONS_00001569 mRNA downstream 41314 7968092 ~ 7975755 (-) False XLOC_000989
TCONS_00001568 mRNA downstream 46416 7964276 ~ 7970653 (-) False XLOC_000989
TCONS_00001575 mRNA upstream 1731 8022320 ~ 8101495 (-) True XLOC_000993
TCONS_00001576 mRNA upstream 107086 8127675 ~ 8140763 (-) False XLOC_000994
TCONS_00001577 mRNA upstream 114355 8134944 ~ 8141135 (-) True XLOC_000994
TCONS_00001578 mRNA upstream 144751 8165340 ~ 8192418 (-) True XLOC_000995
TCONS_00001579 mRNA upstream 395394 8415983 ~ 8428761 (-) False XLOC_000997
TCONS_00001570 other downstream 41300 7970406 ~ 7975769 (-) True XLOC_000989
TCONS_00001564 other downstream 96863 7920119 ~ 7920206 (-) True XLOC_000985
TCONS_00001563 other downstream 97502 7919480 ~ 7919567 (-) True XLOC_000984
TCONS_00001562 other downstream 98187 7918795 ~ 7918882 (-) False XLOC_000984
TCONS_00001556 other downstream 215423 7801531 ~ 7801646 (-) True XLOC_000982
TCONS_00001587 other upstream 532161 8552750 ~ 8553298 (-) True XLOC_000999
TCONS_00001595 other upstream 629520 8650109 ~ 8652655 (-) False XLOC_001004
TCONS_00001610 other upstream 1097511 9118100 ~ 9118671 (-) False XLOC_001012
TCONS_00001617 other upstream 1177270 9197859 ~ 9197966 (-) True XLOC_001018
TCONS_00001629 other upstream 1439421 9460010 ~ 9486080 (-) False XLOC_001025

Expression Profile

//