Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU156341 |
| length | 1042 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 2 |
| gene id | dock8 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 13890404 ~ 13948808 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU156120 | lncRNA | upstream | 91594 | 13794582 ~ 13799616 (+) | True | G132138 |
| TU156118 | lncRNA | upstream | 96905 | 13793156 ~ 13794305 (+) | True | G132136 |
| TU156121 | lncRNA | upstream | 98501 | 13791862 ~ 13792709 (+) | True | G132139 |
| TU156119 | lncRNA | upstream | 99931 | 13790471 ~ 13791279 (+) | False | LOC113527348 |
| TU156088 | lncRNA | upstream | 320238 | 13570392 ~ 13570972 (+) | True | G132115 |
| TU156342 | lncRNA | downstream | 38925 | 13987733 ~ 14022649 (+) | False | aopep |
| TU156369 | lncRNA | downstream | 61695 | 14010503 ~ 14013621 (+) | True | G132357 |
| TU156411 | lncRNA | downstream | 136844 | 14085652 ~ 14087881 (+) | True | G132391 |
| TU156373 | lncRNA | downstream | 168167 | 14116975 ~ 14120415 (+) | True | G132361 |
| TU156430 | lncRNA | downstream | 284220 | 14233028 ~ 14234254 (+) | True | G132405 |
| XM_026925627.2 | mRNA | upstream | 5543 | 13879111 ~ 13885667 (+) | False | lrif1 |
| XM_026925618.2 | mRNA | upstream | 5543 | 13879449 ~ 13885667 (+) | False | lrif1 |
| XM_026925635.2 | mRNA | upstream | 5543 | 13879662 ~ 13885667 (+) | True | lrif1 |
| XM_026937501.2 | mRNA | upstream | 13250 | 13873546 ~ 13877960 (+) | True | apex2 |
| XM_026928709.2 | mRNA | upstream | 23090 | 13838338 ~ 13868120 (+) | True | csde1 |
| XM_026914857.2 | mRNA | downstream | 1129 | 13949937 ~ 14022687 (+) | True | aopep |
| XM_026924980.2 | mRNA | downstream | 206050 | 14154858 ~ 14171793 (+) | True | ercc6l2 |
| XM_026925009.2 | mRNA | downstream | 206050 | 14154858 ~ 14171793 (+) | False | ercc6l2 |
| XM_026924990.2 | mRNA | downstream | 206050 | 14154858 ~ 14171793 (+) | False | ercc6l2 |
| XM_026925000.2 | mRNA | downstream | 206532 | 14155340 ~ 14171793 (+) | False | ercc6l2 |
| TU156117 | other | upstream | 183660 | 13705256 ~ 13707550 (+) | False | LOC113527348 |
| trnae-cuc_18 | other | upstream | 521591 | 13369548 ~ 13369619 (+) | True | trnae-cuc_18 |
| trnaf-gaa_25 | other | upstream | 827088 | 13064050 ~ 13064122 (+) | True | trnaf-gaa_25 |
| trnav-cac_9 | other | upstream | 829202 | 13061936 ~ 13062008 (+) | True | trnav-cac_9 |
| trnad-guc_1 | other | upstream | 1509140 | 12381999 ~ 12382070 (+) | True | trnad-guc_1 |
| TU156645 | other | downstream | 373364 | 14322172 ~ 14323450 (+) | True | G132595 |
| trnae-cuc_19 | other | downstream | 1031025 | 14979833 ~ 14979904 (+) | True | trnae-cuc_19 |
| TU157849 | other | downstream | 2053253 | 16002061 ~ 16011604 (+) | False | G133631 |
| TU157866 | other | downstream | 2053253 | 16002061 ~ 16018783 (+) | True | G133631 |
| XR_004578524.1 | other | downstream | 2453940 | 16402748 ~ 16419509 (+) | False | si:ch211-166a6.5 |
