Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014141 |
| length | 1242 |
| RNA type | mRNA |
| GC content | 0.59 |
| exon number | 5 |
| gene id | AMCG00014141 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 2574463 ~ 2576803 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0019843 | rRNA binding | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02878 | RP-L16, MRPL16, rplP; large subunit ribosomal protein L16 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU84833 | lncRNA | downstream | 201134 | 2350125 ~ 2373329 (-) | True | G67911 |
| TU84811 | lncRNA | downstream | 449556 | 2095067 ~ 2124907 (-) | False | AMCG00014119 |
| TU84810 | lncRNA | downstream | 478832 | 2095306 ~ 2095631 (-) | False | AMCG00014119 |
| TU84803 | lncRNA | downstream | 487342 | 2086111 ~ 2087121 (-) | False | AMCG00014119 |
| TU84795 | lncRNA | downstream | 514972 | 2056849 ~ 2059491 (-) | True | G67881 |
| TU84881 | lncRNA | upstream | 31466 | 2608269 ~ 2608479 (-) | True | G67953 |
| TU85010 | lncRNA | upstream | 120005 | 2696808 ~ 2701159 (-) | True | G68057 |
| TU85014 | lncRNA | upstream | 131014 | 2707817 ~ 2710329 (-) | True | G68061 |
| TU85029 | lncRNA | upstream | 181682 | 2758485 ~ 2758840 (-) | True | G68070 |
| TU85032 | lncRNA | upstream | 188387 | 2765190 ~ 2766174 (-) | False | G68073 |
| AMCG00014131 | mRNA | downstream | 4072 | 2562533 ~ 2570391 (-) | True | AMCG00014131 |
| AMCG00014132 | mRNA | downstream | 26279 | 2542918 ~ 2548184 (-) | True | AMCG00014132 |
| AMCG00014134 | mRNA | downstream | 34105 | 2531954 ~ 2540358 (-) | True | AMCG00014134 |
| AMCG00014138 | mRNA | downstream | 235276 | 2325102 ~ 2339187 (-) | True | AMCG00014138 |
| AMCG00014136 | mRNA | downstream | 295480 | 2268517 ~ 2278983 (-) | True | AMCG00014136 |
| AMCG00014143 | mRNA | upstream | 38452 | 2615255 ~ 2615530 (-) | True | AMCG00014143 |
| AMCG00014145 | mRNA | upstream | 54855 | 2631658 ~ 2635316 (-) | True | AMCG00014145 |
| AMCG00014144 | mRNA | upstream | 64386 | 2641189 ~ 2653247 (-) | True | AMCG00014144 |
| AMCG00014142 | mRNA | upstream | 91178 | 2667981 ~ 2675410 (-) | True | AMCG00014142 |
| AMCG00014150 | mRNA | upstream | 154728 | 2731531 ~ 2734872 (-) | True | AMCG00014150 |
| TU84851 | other | downstream | 31766 | 2540317 ~ 2542697 (-) | False | AMCG00014134 |
| TU84738 | other | downstream | 656281 | 1916727 ~ 1918182 (-) | True | G67843 |
| TU84714 | other | downstream | 671848 | 1900640 ~ 1902615 (-) | True | G67832 |
| TU84719 | other | downstream | 681910 | 1892063 ~ 1892553 (-) | True | G67835 |
| TU84716 | other | downstream | 691513 | 1879203 ~ 1882950 (-) | False | AMCG00014108 |
| TU84998 | other | upstream | 64256 | 2641059 ~ 2643907 (-) | False | AMCG00014144 |
| TU85055 | other | upstream | 248759 | 2825562 ~ 2829144 (-) | True | G68088 |
| TU86038 | other | upstream | 4801285 | 7378088 ~ 7380780 (-) | True | AMCG00014271 |
| TU86071 | other | upstream | 4840795 | 7417598 ~ 7423291 (-) | False | AMCG00014278 |
| TU86293 | other | upstream | 5560528 | 8137331 ~ 8139126 (-) | False | AMCG00014297 |
