RNA id: TU93173


Basic Information

Item Value
RNA id TU93173
length 284
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G74611
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40043007 ~ 40043290 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ccagggtgaaaaggttcagttcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtgcattgtacagtctgaacatcactgcccttgttctcaattctacacttttgacaatataccctaacactctgtttgccttttttattgcttccccacattgtttggatggagaaagtgagg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93149 lncRNA downstream 30926 40011069 ~ 40012081 (-) False G74593
TU93150 lncRNA downstream 30926 40011069 ~ 40012081 (-) False G74593
TU93153 lncRNA downstream 30926 40011069 ~ 40012081 (-) False G74593
TU93159 lncRNA downstream 37940 39962930 ~ 40005067 (-) False G74597
TU93158 lncRNA downstream 37940 39987502 ~ 40005067 (-) True G74597
TU93190 lncRNA upstream 58603 40101893 ~ 40139101 (-) True G74625
TU93199 lncRNA upstream 85631 40128921 ~ 40129366 (-) True G74633
TU93315 lncRNA upstream 253571 40296861 ~ 40299179 (-) True G74725
TU93327 lncRNA upstream 294774 40338064 ~ 40340395 (-) True G74736
TU93328 lncRNA upstream 294774 40338064 ~ 40360225 (-) False G74736
AMCG00014930 mRNA downstream 3682 40029772 ~ 40039325 (-) True AMCG00014930
AMCG00014927 mRNA downstream 82011 39958825 ~ 39960996 (-) True AMCG00014927
AMCG00014924 mRNA downstream 220918 39820563 ~ 39822089 (-) True AMCG00014924
AMCG00014920 mRNA downstream 278367 39762570 ~ 39764640 (-) True AMCG00014920
AMCG00014916 mRNA downstream 385445 39648804 ~ 39657562 (-) True AMCG00014916
AMCG00014935 mRNA upstream 42486 40085776 ~ 40107665 (-) True AMCG00014935
AMCG00014933 mRNA upstream 110129 40153419 ~ 40160349 (-) True AMCG00014933
AMCG00014934 mRNA upstream 119096 40162386 ~ 40164580 (-) True AMCG00014934
AMCG00014938 mRNA upstream 191768 40235058 ~ 40268485 (-) True AMCG00014938
AMCG00014946 mRNA upstream 237904 40281194 ~ 40292569 (-) True AMCG00014946
TU93148 other downstream 30926 39934893 ~ 40012081 (-) True G74593
TU93152 other downstream 30926 39984694 ~ 40012081 (-) False G74593
TU93111 other downstream 59611 39901470 ~ 39983396 (-) True G74569
TU93146 other downstream 91937 39944730 ~ 39951070 (-) True G74591
TU92969 other downstream 404050 39637899 ~ 39638957 (-) True G74477
TU93302 other upstream 193112 40236402 ~ 40236795 (-) False AMCG00014938
TU93314 other upstream 248866 40292156 ~ 40294526 (-) False AMCG00014946
TU93316 other upstream 259941 40303231 ~ 40304085 (-) True G74726
TU93349 other upstream 358493 40401783 ~ 40405328 (-) False AMCG00014951
TU93466 other upstream 394049 40437339 ~ 40534709 (-) False AMCG00014949

Expression Profile