RNA id: TU24



Basic Information


Item Value
RNA id TU24
length 485
RNA type TUCP
GC content 0.36
exon number 1
gene id G10
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 177716 ~ 178200 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AATTGTCTATGACTACTCGCAccaagcctaaacaaattccattcttatctggttttgactccCTGTACCATGCACTGGCCTCGGCCAAGGccactgctggaaaaacaactccCCCGGCAGATCACGGCAGTGAAGACGCTCTCGCACTCCTCACCCCCACCTTTCCGCCTGCCTGGCAGACGGGTCTGGATCAAGCGCTGCATCGACGGCTGCCAGAGAAGGATGACTGCTCGCCAGTGGAGGATCCCAATAACCCAGATTTTTACCTTGTCTTACATGTTGTCAAAAGTGTCTAAACTATGTGCTTCtattgctgaggtgtttttttcccGTTACCACACTGTGGTCCCTTAGGAGCACAGTCTGGGTTtggcttattttttttctcgcctcacctctcctcatgtaatgctgtacttctttatttctgtcatcccgTCATGTCTACCCCCATCTTCTATCTGTatgtggatgggatgatggcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU22 lncRNA upstream 21370 155927 ~ 156346 (+) True G8
XR_006251810.1 lncRNA upstream 104975 71631 ~ 72741 (+) True LOC122351887
TU26 lncRNA downstream 9599 187799 ~ 188148 (+) True G12
TU48 lncRNA downstream 27913 206113 ~ 206350 (+) True G21
TU85 lncRNA downstream 215439 393639 ~ 393899 (+) True G55
TU107 lncRNA downstream 263699 441899 ~ 442197 (+) True G69
TU109 lncRNA downstream 268510 446710 ~ 446923 (+) False LOC122341994
XM_043235769.1 mRNA downstream 267740 445940 ~ 449640 (+) True LOC122341994
XM_043233795.1 mRNA downstream 389655 567855 ~ 592341 (+) True LOC122337612
XM_043235832.1 mRNA downstream 550871 729071 ~ 738922 (+) True LOC122342042
XM_043235725.1 mRNA downstream 864983 1043183 ~ 1047811 (+) False LOC122341978
XM_043235748.1 mRNA downstream 864985 1043185 ~ 1045789 (+) False ggact.3
TU190 other downstream 941519 1119719 ~ 1120721 (+) True G136
TU309 other downstream 1260873 1439073 ~ 1441439 (+) False LOC122327253
TU310 other downstream 1260873 1439073 ~ 1441439 (+) False LOC122327253
TU311 other downstream 1260873 1439073 ~ 1441666 (+) True LOC122327253
TU616 other downstream 2007659 2185859 ~ 2192464 (+) True cyyr1

Expression Profile