RNA id: TU26


Basic Information

Item Value
RNA id TU26
length 350
lncRNA type inter_gene
GC content 0.59
exon number 1
gene id G12
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 187799 ~ 188148 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCAAAATCCCCTTCCTCACGCATGCGCGAGTCGAACTTGTCCGGACTTGTCTGGACTTGTCTAGTGCAGGCGAGAAGAAGTTCGAGTTTGGCACCATCTAGAATAGCGGAGTAATACAGAGTTCCCTggctttgtttatttctttaaagtctgTTTTCTATTGTGTGGTATTGTTGTGCGTTGATAATTCCGTAAGTAACAATATTTGTTATCATTGTAGATGTGTTTCAGAGTGTTATAACGTAATTCAGTTTATTCTACCTCAGCTTGAGTTATTACGATGGCgtcattataaatgcaatagcTAGGCATTTGACACGTCATTTGATTGTtcgcaatatatatatata

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU22 lncRNA upstream 31453 155927 ~ 156346 (+) True G8
XR_006251810.1 lncRNA upstream 115058 71631 ~ 72741 (+) True LOC122351887
TU48 lncRNA downstream 17965 206113 ~ 206350 (+) True G21
TU85 lncRNA downstream 205491 393639 ~ 393899 (+) True G55
TU107 lncRNA downstream 253751 441899 ~ 442197 (+) True G69
TU109 lncRNA downstream 258562 446710 ~ 446923 (+) False LOC122341994
XR_006251348.1 lncRNA downstream 277772 465920 ~ 466854 (+) True LOC122348617
XM_043235769.1 mRNA downstream 257792 445940 ~ 449640 (+) True LOC122341994
XM_043233795.1 mRNA downstream 379707 567855 ~ 592341 (+) True LOC122337612
XM_043235832.1 mRNA downstream 540923 729071 ~ 738922 (+) True LOC122342042
XM_043235725.1 mRNA downstream 855035 1043183 ~ 1047811 (+) False LOC122341978
XM_043235748.1 mRNA downstream 855037 1043185 ~ 1045789 (+) False ggact.3
TU24 other upstream 9599 177716 ~ 178200 (+) True G10
TU190 other downstream 931571 1119719 ~ 1120721 (+) True G136
TU309 other downstream 1250925 1439073 ~ 1441439 (+) False LOC122327253
TU310 other downstream 1250925 1439073 ~ 1441439 (+) False LOC122327253
TU311 other downstream 1250925 1439073 ~ 1441666 (+) True LOC122327253
TU616 other downstream 1997711 2185859 ~ 2192464 (+) True cyyr1

Expression Profile