Fish Single-cell RNA Database

CELL TYPE: Blood precursors

Distribution of Blood precursors in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000012684	atp2b1a	4: 16076719 ~ 16124419 (-)
ENSDARG00000036893	f13a1b	7: 8267985 ~ 8344243 (-)
ENSDARG00000000767	spi1b	7: 32644673 ~ 32659353 (-)
ENSDARG00000036074	cebpa	7: 38084986 ~ 38087865 (-)
ENSDARG00000075831	slc7a8a	7: 24208611 ~ 24236364 (-)
ENSDARG00000044125	txn	7: 24357231 ~ 24364826 (-)
ENSDARG00000055504	si:ch211-212k18.7	7: 19482084 ~ 19491627 (+)
ENSDARG00000004015	adcyap1a	7: 71547747 ~ 71556734 (+)
ENSDARG00000079012	cbfa2t3	7: 55660263 ~ 55675617 (-)
ENSDARG00000058365	hspb8	5: 15819651 ~ 15840485 (+)
ENSDARG00000033735	ncf1	5: 61432541 ~ 61445697 (-)
ENSDARG00000094706	cxcl11.6	5: 42076672 ~ 42077575 (-)
ENSDARG00000009418	mef2cb	5: 48179340 ~ 48307804 (-)
ENSDARG00000078004	drl	5: 61645156 ~ 61652254 (-)
ENSDARG00000060751	taok3a	5: 15359995 ~ 15494297 (-)
ENSDARG00000004954	grna	3: 29914427 ~ 29941357 (-)
ENSDARG00000054610	coro1a	3: 30926364 ~ 30941362 (-)
ENSDARG00000088283	si:ch73-248e21.5	3: 32607780 ~ 32611833 (-)
ENSDARG00000038010	rac2	3: 29510818 ~ 29544039 (+)
ENSDARG00000079808	si:ch73-208g10.1	3: 54502350 ~ 54524194 (-)
ENSDARG00000101169	grap2b	6: 427317 ~ 442276 (-)
ENSDARG00000010384	lpar5a	2: 48282590 ~ 48284160 (+)
ENSDARG00000104077	fcer1gl	2: 58077662 ~ 58085444 (-)
ENSDARG00000104290	ripk2	2: 7557912 ~ 7587660 (+)
ENSDARG00000088019	si:ch211-114l13.12	1: 57981823 ~ 57991025 (+)
ENSDARG00000052016	cabp2a	1: 44127292 ~ 44141442 (+)
ENSDARG00000053542	kctd12.2	1: 34295925 ~ 34297403 (+)
ENSDARG00000070266	spock3	1: 20635190 ~ 20706296 (+)
ENSDARG00000042824	nfe2l2a	9: 1654284 ~ 1683368 (+)
ENSDARG00000019815	fn1a	9: 15362300 ~ 15424639 (-)
ENSDARG00000016939	itgb2	9: 44961138 ~ 44983666 (-)
ENSDARG00000099980	bpifcl	9: 343062 ~ 353894 (+)
ENSDARG00000023188	lcp1	9: 56251000 ~ 56272465 (-)
ENSDARG00000018569	tnfrsf1a	16: 17060758 ~ 17072561 (-)
ENSDARG00000089043	ptpn6	16: 31720042 ~ 31756963 (-)
ENSDARG00000040930	deptor	16: 14588141 ~ 14675907 (+)
ENSDARG00000040251	ctsk	16: 29492749 ~ 29502787 (+)
ENSDARG00000079553	cd83	16: 38394371 ~ 38397359 (+)
ENSDARG00000104474	il6r	16: 22177254 ~ 22194400 (-)
ENSDARG00000029036	rab32a	20: 32009271 ~ 32045182 (-)
ENSDARG00000009134	hlx1	20: 52195525 ~ 52199311 (-)
ENSDARG00000056331	ahcyl1	8: 24971890 ~ 25011157 (-)
ENSDARG00000042725	cebpb	8: 28448267 ~ 28449782 (-)
ENSDARG00000086708	CR847543.1	8: 25342896 ~ 25351695 (+)
ENSDARG00000044073	fuca2	17: 6438051 ~ 6451801 (-)
ENSDARG00000030490	sptb	17: 38566717 ~ 38599022 (+)
ENSDARG00000015449	fut8a	17: 33719415 ~ 33906488 (+)
ENSDARG00000098774	si:zfos-741a10.3	14: 699229 ~ 706345 (-)
ENSDARG00000076189	ccdc88b	14: 45702521 ~ 45772506 (+)
ENSDARG00000010625	clic2	14: 33882973 ~ 33892311 (+)
ENSDARG00000061591	abcb10	13: 24263049 ~ 24277532 (+)
ENSDARG00000077009	wdfy4	13: 30985047 ~ 31025505 (-)
ENSDARG00000013539	ikzf1	13: 15957508 ~ 15994472 (-)
ENSDARG00000056407	irf8	18: 30567945 ~ 30573849 (+)
ENSDARG00000095019	lmo2	18: 38288877 ~ 38296665 (+)
ENSDARG00000018283	cyba	18: 31073265 ~ 31075619 (+)
ENSDARG00000090767	si:ch211-136m16.8	12: 3981346 ~ 3992839 (-)
ENSDARG00000004378	yrk	19: 43359075 ~ 43432415 (+)
ENSDARG00000087611	FP085398.1	19: 26828502 ~ 26844582 (+)
ENSDARG00000054543	samsn1a	15: 29564364 ~ 29586747 (-)
ENSDARG00000043102	lxn	15: 1179876 ~ 1198886 (-)
ENSDARG00000058413	rnaset2l	15: 20395309 ~ 20400438 (-)
ENSDARG00000020610	tnnt2a	23: 5653224 ~ 5685172 (-)
ENSDARG00000053666	myb	23: 31815423 ~ 31830043 (+)
ENSDARG00000004301	rhogb	21: 30937690 ~ 30951909 (+)
ENSDARG00000055955	lcp2a	21: 30306369 ~ 30347592 (+)
ENSDARG00000013430	bhmt	21: 40408 ~ 45920 (-)
ENSDARG00000044975	krt94	11: 11468566 ~ 11471857 (-)
ENSDARG00000056615	cybb	11: 29795155 ~ 29818866 (-)
ENSDARG00000007494	st3gal8	11: 26568492 ~ 26590429 (-)
ENSDARG00000053113	ly75	11: 11120532 ~ 11193205 (+)
ENSDARG00000036456	anxa4	10: 41159241 ~ 41192881 (+)
ENSDARG00000030914	tmem120a	10: 35265083 ~ 35275350 (+)
ENSDARG00000068516	hapln1b	10: 43269918 ~ 43334999 (-)
ENSDARG00000044295	pip5k1ba	10: 15881309 ~ 15919839 (-)
ENSDARG00000114451	mmp13a	10: 38610741 ~ 38620514 (+)
ENSDARG00000071491	nrros	24: 28410963 ~ 28419444 (-)
ENSDARG00000019307	dusp5	22: 29911326 ~ 29922872 (-)
ENSDARG00000019930	tal1	22: 16535575 ~ 16545330 (+)
ENSDARG00000031954	rbck1	22: 10145098 ~ 10165446 (-)
ENSDARG00000076721	zgc:171686	22: 9939901 ~ 9945637 (+)
ENSDARG00000043126	blf	22: 9917007 ~ 9923692 (+)
ENSDARG00000067711	parvg	25: 5068442 ~ 5084539 (+)
--	rassf5	--
--	fam212ab	--
--	si:ch211-157e21.22	--
--	si:dkey-4i23.7	--
--	wu:fd14a06	--
--	si:dkey-261j4.3	--
--	si:dkey-261j4.4	--
--	sla1	--
--	cabz01034529.1	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Blood precursors.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE158142 (16hpf)	Danio rerio	head	16	Blood precursors	baseline	16hpf, 14 somites, untreatment	ENSDARG00000000767 (spi1b)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (16hpf)	Danio rerio	head	16	Blood precursors	baseline	16hpf, 14 somites, untreatment	ENSDARG00000114451 (mmp13a)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (16hpf)	Danio rerio	head	16	Blood precursors	baseline	16hpf, 14 somites, untreatment	ENSDARG00000013539 (ikzf1)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (16hpf)	Danio rerio	head	16	Blood precursors	baseline	16hpf, 14 somites, untreatment	ENSDARG00000033735 (ncf1)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (18hpf)	Danio rerio	head	20	Blood precursors	baseline	18hpf, 18 somites, untreatment	ENSDARG00000114451 (mmp13a)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (18hpf)	Danio rerio	head	20	Blood precursors	baseline	18hpf, 18 somites, untreatment	ENSDARG00000000767 (spi1b)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (18hpf)	Danio rerio	head	20	Blood precursors	baseline	18hpf, 18 somites, untreatment	ENSDARG00000013539 (ikzf1)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (18hpf)	Danio rerio	head	20	Blood precursors	baseline	18hpf, 18 somites, untreatment	ENSDARG00000033735 (ncf1)	marker	DOI:10.1016/j.neuron.2020.09.023

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Blood precursors

Distribution of Blood precursors in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences