GENE ID: ENSDARG00000088283


Symbol Location Gene type Genome version Species
si:ch73-248e21.5 3: 32607780 ~ 32611833 (-) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION


Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Myeloid cells (cluster: 6)
Myeloid cells (cluster: 8)
Epidermal cells (cluster: 9)
potential marker
potential marker
potential marker
NA
NA
NA
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Myeloid cells (cluster: 4)
potential marker
NA
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Immune cells (cluster: 11)
Immune cells (cluster: 20)
Immune cells (cluster: 4)
potential marker
potential marker
potential marker
NA
NA
NA
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Immune cells (cluster: 19)
Immune cells (cluster: 4)
Immune cells (cluster: 8)
potential marker
potential marker
potential marker
NA
NA
NA
GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry Immune cells (cluster: 5)
potential marker
NA
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells Endothelium (cluster: 5)
potential marker
NA
PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells Endothelium (cluster: 3)
potential marker
NA
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Multipotent cells (cluster: 14)
Monocytes (cluster: 26)
Leukocytes (cluster: 27)
potential marker
potential marker
potential marker
NA
NA
NA
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Monocytes (cluster: 24)
potential marker
NA
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Monocytes (cluster: 28)
potential marker
NA
GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Inflammatory macrophages (cluster: 10)
Epithelialized macrophages (cluster: 12)
potential marker
potential marker
NA
NA
GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Blood precursors (cluster: 20)
potential marker
NA
GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Neutrophils (cluster: 16)
potential marker
NA
PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured Neutrophils (cluster: 13)
potential marker
NA
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Neutrophils (cluster: 10)
potential marker
NA
PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured Macrophages (cluster: 5)
Neutrophils (cluster: 9)
potential marker
potential marker
NA
NA
PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Neutrophils (cluster: 11)
potential marker
NA
PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Neutrophils (cluster: 15)
potential marker
NA
PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury Neutrophils (cluster: 15)
potential marker
NA
PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood Granule cells (cluster: 14)
potential marker
NA
GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC Immune cells (cluster: 7)
potential marker
NA
GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Immune cells (cluster: 9)
potential marker
NA
PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Immune cells (cluster: 10)
Immune cells (cluster: 5)
potential marker
potential marker
NA
NA
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells Macrophages (cluster: 4)
potential marker
NA
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Neutrophils (cluster: 31)
Macrophages (cluster: 42)
potential marker
potential marker
NA
NA
GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/- Neutrophils (cluster: 7)
potential marker
NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Neutrophils (cluster: 11)
Macrophages (cluster: 7)
potential marker
potential marker
NA
NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 10)
Neutrophils (cluster: 6)
potential marker
potential marker
NA
NA
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled)
PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
GSE158142 (2dpf) head baseline 2dpf, untreatment
GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
GSE158142 (3dpf) head baseline 3dpf, untreatment
PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury
PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury
PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver
PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment
GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl
GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS
GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated
GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS
GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated
GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours
PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days
GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet
GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih
GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
PRJNA641144 (P_PRO) tumor disease adult, ZMEL1-PRO cells in vivo primary tumors
PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases
PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT

    After clicking the magnifying glass button, the clustering and expression information will be displayed below.