Fish Single-cell RNA Database

CELL TYPE: Red blood cells

Distribution of Red blood cells in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSORLG00000027969	si:ch211-103n10.5	9: 9628131 ~ 9628673 (+)
ENSORLG00000017221	NA	22: 15139453 ~ 15140050 (-)
ENSORLG00000027445	NA	8: 8230134 ~ 8231214 (-)
ENSORLG00000026120	gb	19: 3025017 ~ 3129059 (-)
ENSORLG00000003046	gb	19: 3028213 ~ 3030294 (+)
ENSDARG00000015551	fth1a	7: 12927944 ~ 12936708 (+)
ENSDARG00000035519	histh1l	5: 27432958 ~ 27434351 (+)
ENSDARG00000045982	si:ch73-55i23.1	5: 1933131 ~ 1947624 (+)
ENSDARG00000069734	hbba2	3: 55091230 ~ 55092051 (-)
ENSDARG00000097011	hbaa1	3: 55100045 ~ 55100936 (+)
ENSDARG00000089087	hbba1	3: 55103445 ~ 55104310 (-)
ENSDARG00000079078	si:ch211-5k11.8	3: 55105066 ~ 55105966 (+)
ENSDARG00000113599	hbbe1.1	3: 55114097 ~ 55114874 (+)
ENSDARG00000089475	hbae1.1	3: 55120330 ~ 55121125 (-)
ENSDARG00000115405	hbbe1.2	3: 55122662 ~ 55123439 (+)
ENSDARG00000087390	hbbe1.3	3: 55131289 ~ 55132052 (+)
ENSDARG00000089124	hbae1.3	3: 55138413 ~ 55139127 (-)
ENSDARG00000079305	hbae3	3: 55146418 ~ 55147788 (-)
ENSDARG00000011166	cahz	2: 29477383 ~ 29485408 (-)
ENSDARG00000025350	prdx2	1: 51721851 ~ 51729862 (+)
ENSDARG00000096667	hemgn	1: 26667872 ~ 26671210 (+)
ENSDARG00000029019	epb41b	16: 26449615 ~ 26488169 (+)
ENSDARG00000070426	chac1	20: 28266892 ~ 28269462 (+)
ENSDARG00000038643	alas2	8: 21353878 ~ 21369028 (+)
ENSDARG00000077504	si:ch211-103n10.5	8: 29718692 ~ 29719393 (-)
ENSDARG00000074441	gp1bb	8: 4576132 ~ 4586696 (-)
ENSDARG00000045143	hbbe2	12: 20349865 ~ 20350629 (-)
ENSDARG00000038147	hbbe3	12: 20339413 ~ 20340543 (-)
ENSDARG00000045144	zgc:163057	12: 20336070 ~ 20337274 (+)
ENSDARG00000092945	si:ch211-250g4.3	19: 37509638 ~ 37519610 (+)
ENSDARG00000090638	gp9	23: 4689626 ~ 4692550 (+)
ENSDARG00000034852	nt5c2l1	10: 17460358 ~ 17484764 (-)
ENSDARG00000096917	si:ch211-227m13.1	22: 13276693 ~ 13350356 (-)
--	hbae1.3.1	--
--	hbba1.1	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Red blood cells.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE161712 (M. marinum)	Danio rerio	granulomas	15	Red blood cells	disease	adult, infected with bacteria of M. marinum	-- (hbba1.1)	marker	DOI:10.1016/j.cell.2021.02.046
GSE162787 (male)	Oryzias latipes	pituitary	11	Red blood cells	baseline	male, adult, untreatment	ENSORLG00000003046 (gb)	marker	DOI:10.1038/s41597-021-01058-8
GSE162787 (female)	Oryzias latipes	pituitary	11	Red blood cells	baseline	female, adult, untreatment	ENSORLG00000003046 (gb)	marker	DOI:10.1038/s41597-021-01058-8
GSE152982 (wild type)	Danio rerio	trunk	12	Red blood cells	baseline	1.25dpf, untreatment	ENSDARG00000087390 (hbbe1.3)	marker	DOI:10.1371/journal.pone.0254024
GSE152982 (wild type)	Danio rerio	trunk	12	Red blood cells	baseline	1.25dpf, untreatment	ENSDARG00000079305 (hbae3)	marker	DOI:10.1371/journal.pone.0254024

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Red blood cells

Distribution of Red blood cells in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences