GENE ID: ENSDARG00000087390

Symbol Location Gene type Genome version Species
hbbe1.3 3: 55131289 ~ 55132052 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000087390 (hbbe1.3), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment Red blood cells (cluster: 12)
    		 marker
    		 DOI:10.1371/journal.pone.0254024
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Erythroid cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Erythroid cells (cluster: 12)
    Erythroid cells (cluster: 3)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Erythroid cells (cluster: 1)
    		 potential marker
    		 NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Erythroid cells (cluster: 1)
    Erythroid cells (cluster: 2)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Erythroid cells (cluster: 1)
    		 potential marker
    		 NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Hematopoietic cells (cluster: 8)
    		 potential marker
    		 NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Erythroid cells (cluster: 28)
    Hematopoietic cells (cluster: 9)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Hematopoietic cells (cluster: 21)
    		 potential marker
    		 NA
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl Enteric neuron (cluster: 13)
    		 potential marker
    		 NA
    GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Erythroid cells (cluster: 44)
    		 potential marker
    		 NA
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
    GSE151354 (wild type) cartilage baseline 21dpf, wild type
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
    PRJNA734348 (shield, control) embryo baseline 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
    PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
    GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS
    GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated
    GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
    GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases
    PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases

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