DATASET ID: GSE163907 (24hpf)

Basic information

Tissue / Organ trunk
Experiment type baseline
Sample 24hpf, trunk tg(sox10:GFP) positive cells
Source dataset ID GSM4990514
Project ID GSE163907
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 TNCC progenitors ENSDARG00000053959 (cdc42ep2) protein_coding marker DOI:10.7554/eLife.66078
    2 Posterior arch ENSDARG00000079964 (dlx2a) protein_coding marker DOI:10.7554/eLife.66078
    3 Xanthoblast ENSDARG00000071475 (aox5) protein_coding marker DOI:10.7554/eLife.66078
    4 Pigment cells ENSDARG00000003732 (mitfa) protein_coding marker DOI:10.7554/eLife.66078
    7 Otic ENSDARG00000040534 (epcam) protein_coding marker DOI:10.7554/eLife.66078
    9 Mesenchymal cells ENSDARG00000100133 (cnmd) protein_coding marker DOI:10.7554/eLife.66078

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)