DATASET ID: GSE137784 (no HCC)

Basic information

Tissue / Organ liver
Experiment type baseline
Sample 6mpf, male, isolated from the CreLox zebrafish with HCC
Source dataset ID GSM4087821
Project ID GSE137784
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 Hepatocytes ENSDARG00000043719 (c3a.6) protein_coding marker DOI:10.1242/bio.047829
    2 Immune cells ENSDARG00000058348 (scinlb) protein_coding marker DOI:10.1242/bio.047829
    3 Endothelium ENSDARG00000014646 (aoc2) protein_coding marker DOI:10.1242/bio.047829
    4 Hepatocytes ENSDARG00000053684 (aldob) protein_coding marker DOI:10.1242/bio.047829
    5 Immune cells ENSDARG00000095627 (c1qc) protein_coding marker DOI:10.1242/bio.047829
    6 Hepatocytes ENSDARG00000016771 (tfa) protein_coding marker DOI:10.1242/bio.047829
    7 Epidermal cells ENSDARG00000016691 (cd9b) protein_coding marker DOI:10.1242/bio.047829
    8 Erythroid cells ENSDARG00000034852 (nt5c2l1) protein_coding marker DOI:10.1242/bio.047829
    9 Immune cells ENSDARG00000090783 (mfap4) protein_coding marker DOI:10.1242/bio.047829

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)