DATASET ID: GSE158849 (labeled)

Basic information

Tissue / Organ embryo
Experiment type baseline
Sample 6hpf, WT, 4sUTP injected (labeled)
Source dataset ID GSM4812182
Project ID GSE158849
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 Ectoderm cells -- (h2afva) -- marker DOI:10.1038/s41467-021-23834-1
    1 Ectoderm cells ENSDARG00000032866 (erh) protein_coding marker DOI:10.1038/s41467-021-23834-1
    1 Ectoderm cells ENSDARG00000099859 (CR383676.1) sRNA marker DOI:10.1038/s41467-021-23834-1
    4 Non-axial mesoderm cells ENSDARG00000068761 (mespab) protein_coding marker DOI:10.1038/s41467-021-23834-1
    4 Non-axial mesoderm cells ENSDARG00000070546 (msgn1) protein_coding marker DOI:10.1038/s41467-021-23834-1
    4 Non-axial mesoderm cells ENSDARG00000017078 (mespaa) protein_coding marker DOI:10.1038/s41467-021-23834-1
    4 Non-axial mesoderm cells ENSDARG00000034610 (insb) protein_coding marker DOI:10.1038/s41467-021-23834-1
    5 Ectoderm cells -- (h2afva) -- marker DOI:10.1038/s41467-021-23834-1
    5 Ectoderm cells ENSDARG00000032866 (erh) protein_coding marker DOI:10.1038/s41467-021-23834-1
    6 Axial mesoderm cells ENSDARG00000006110 (chrd) protein_coding marker DOI:10.1038/s41467-021-23834-1
    6 Axial mesoderm cells ENSDARG00000059073 (gsc) protein_coding marker DOI:10.1038/s41467-021-23834-1
    6 Axial mesoderm cells ENSDARG00000012788 (foxa3) protein_coding marker DOI:10.1038/s41467-021-23834-1
    7 Enveloping layer cells ENSDARG00000093584 (zgc:193505) protein_coding marker DOI:10.1038/s41467-021-23834-1
    7 Enveloping layer cells ENSDARG00000104181 (tmsb1) protein_coding marker DOI:10.1038/s41467-021-23834-1
    7 Enveloping layer cells ENSDARG00000017624 (krt4) protein_coding marker DOI:10.1038/s41467-021-23834-1
    7 Enveloping layer cells ENSDARG00000055046 (ponzr5) protein_coding marker DOI:10.1038/s41467-021-23834-1
    7 Enveloping layer cells ENSDARG00000043442 (zgc:153665) protein_coding marker DOI:10.1038/s41467-021-23834-1
    7 Enveloping layer cells ENSDARG00000036834 (krt92) protein_coding marker DOI:10.1038/s41467-021-23834-1
    7 Enveloping layer cells ENSDARG00000000212 (krt97) protein_coding marker DOI:10.1038/s41467-021-23834-1
    9 Primordial germ cells ENSDARG00000096095 (buc) protein_coding marker DOI:10.1038/s41467-021-23834-1
    9 Primordial germ cells ENSDARG00000060917 (anln) protein_coding marker DOI:10.1038/s41467-021-23834-1

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)