DATASET ID: GSE106587 (MZoep mutant)

Basic information

Tissue / Organ embryo
Experiment type baseline
Sample 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
Source dataset ID GSM3084403
Project ID GSE106587
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    2 Telencephalon ENSDARG00000070769 (foxg1a) protein_coding marker DOI:10.1126/science.aar3131
    3 EVL, Periderm ENSDARG00000017624 (krt4) protein_coding marker DOI:10.1126/science.aar3131
    4 Optic cup ENSDARG00000052893 (rx3) protein_coding marker DOI:10.1126/science.aar3131
    5 Placode Trigeminal ENSDARG00000101831 (irx1a) protein_coding marker DOI:10.1126/science.aar3131
    6 Tailbud -- (ta) -- marker DOI:10.1126/science.aar3131
    6 Tailbud ENSDARG00000003399 (fgf8a) protein_coding marker DOI:10.1126/science.aar3131
    7 Optic cup ENSDARG00000052893 (rx3) protein_coding marker DOI:10.1126/science.aar3131
    8 Epidermal cells ENSDARG00000045887 (mmp30) protein_coding marker DOI:10.1126/science.aar3131
    9 Placode ENSDARG00000071560 (dlx4b) protein_coding marker DOI:10.1126/science.aar3131
    11 Neural crest ENSDARG00000021032 (foxd3) protein_coding marker DOI:10.1126/science.aar3131
    11 Neural crest ENSDARG00000043923 (sox9b) protein_coding marker DOI:10.1126/science.aar3131
    11 Neural crest ENSDARG00000077467 (sox10) protein_coding marker DOI:10.1126/science.aar3131

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)