DATASET ID: GSE126647 (control)

Basic information

Tissue / Organ embryo
Experiment type baseline
Sample 1.17dpf, control nkx2.5:ZsYellow+ cells
Source dataset ID GSM3610370
Project ID GSE126647
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    2 Differentiated art.CMs ENSDARG00000028213 (ttn.2) protein_coding marker DOI:10.1242/dev.185652
    3 More-differentiated SHFPs ENSDARG00000058179 (ackr3b) protein_coding marker DOI:10.1242/dev.185652
    4 Less-differentiated SHFPs ENSDARG00000037116 (cxcl12a) protein_coding marker DOI:10.1242/dev.185652
    8 Endothelium ENSDARG00000103533 (clec14a) protein_coding marker DOI:10.1242/dev.185652
    10 SHFP ENSDARG00000104181 (tmsb1) protein_coding marker DOI:10.1242/dev.185652
    12 Skeletal muscle cells ENSDARG00000035958 (tnni2b.1) protein_coding marker DOI:10.1242/dev.185652
    13 SHFP ENSDARG00000102178 (emilin2b) protein_coding marker DOI:10.1242/dev.185652

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)