DATASET ID: GSE150498 (untreated ctrl)

Basic information

Tissue / Organ intestine
Experiment type baseline
Sample 6dpf, untreated ctrl
Source dataset ID GSM4551415
Project ID GSE150498
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    2 Chondrocytes ENSDARG00000093381 (tgm2l) protein_coding marker DOI:10.1038/s41586-021-03484-5
    2 Chondrocytes ENSDARG00000059391 (gyg1b) protein_coding marker DOI:10.1038/s41586-021-03484-5
    3 Smooth muscle cells ENSDARG00000030980 (csrp1b) protein_coding marker DOI:10.1038/s41586-021-03484-5
    3 Smooth muscle cells ENSDARG00000086391 (cald1b) protein_coding marker DOI:10.1038/s41586-021-03484-5
    4 Enterocytes ENSDARG00000012076 (apoa1a) protein_coding marker DOI:10.1038/s41586-021-03484-5
    5 Epithelial cells ENSDARG00000016691 (cd9b) protein_coding marker DOI:10.1038/s41586-021-03484-5
    6 Epithelial cells ENSDARG00000104314 (nrg1) protein_coding marker DOI:10.1038/s41586-021-03484-5
    8 Epithelial cells ENSDARG00000079302 (and2) protein_coding marker DOI:10.1038/s41586-021-03484-5
    9 Hepatocytes ENSDARG00000043719 (c3a.6) protein_coding marker DOI:10.1038/s41586-021-03484-5
    10 Endothelium ENSDARG00000105215 (kdrl) protein_coding marker DOI:10.1038/s41586-021-03484-5
    11 Epithelial cells ENSDARG00000092947 (cyt1) protein_coding marker DOI:10.1038/s41586-021-03484-5
    13 Enteric neuron ENSDARG00000099744 (gap43) protein_coding marker DOI:10.1038/s41586-021-03484-5
    15 Pancreatic cells ENSDARG00000018263 (pdia2) protein_coding marker DOI:10.1038/s41586-021-03484-5

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)