DATASET ID: GSE150498 (DSS treated)

Basic information

Tissue / Organ intestine
Experiment type disease
Sample 6dpf, DSS treated
Source dataset ID GSM4551416
Project ID GSE150498
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 Enterocytes ENSDARG00000012076 (apoa1a) protein_coding marker DOI:10.1038/s41586-021-03484-5
    2 Enterocytes ENSDARG00000012076 (apoa1a) protein_coding marker DOI:10.1038/s41586-021-03484-5
    3 Mesenchymal cells ENSDARG00000093303 (ifitm1) protein_coding marker DOI:10.1038/s41586-021-03484-5
    4 Epithelial cells ENSDARG00000040534 (epcam) protein_coding marker DOI:10.1038/s41586-021-03484-5
    5 Smooth muscle cells ENSDARG00000030980 (csrp1b) protein_coding marker DOI:10.1038/s41586-021-03484-5
    5 Smooth muscle cells ENSDARG00000086391 (cald1b) protein_coding marker DOI:10.1038/s41586-021-03484-5
    6 Pancreatic cells ENSDARG00000018263 (pdia2) protein_coding marker DOI:10.1038/s41586-021-03484-5
    7 Endothelium ENSDARG00000105215 (kdrl) protein_coding marker DOI:10.1038/s41586-021-03484-5
    9 Hepatocytes ENSDARG00000043719 (c3a.6) protein_coding marker DOI:10.1038/s41586-021-03484-5
    12 Epithelial cells ENSDARG00000079302 (and2) protein_coding marker DOI:10.1038/s41586-021-03484-5
    13 Chondrocytes ENSDARG00000073699 (col9a1a) protein_coding marker DOI:10.1038/s41586-021-03484-5
    13 Chondrocytes ENSDARG00000093381 (tgm2l) protein_coding marker DOI:10.1038/s41586-021-03484-5

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)