Fish Single-cell RNA Database

GENE ID: ENSDARG00000105631

Symbol	Location	Gene type	Genome version	Species
NA	7: 808916 ~ 823495 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	Neuron (cluster: 11)	potential marker	NA
	PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	Cone (cluster: 3)	potential marker	NA
	PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih	Cone (cluster: 4)	potential marker	NA
	PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
	PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
	PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days
	PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
	PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet

After clicking the magnifying glass button, the clustering and expression information will be displayed below.